MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-P1b

Family name MIR-430 (all species)
Seed CUUUAAC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xtr-Mir-430-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030725.1: 56777057-56777118 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGGAAUGGAAAAGGAAGAAUCCCCCACUACUUUAACAUCGGUGUACUUUCUGUGUCUUUAAAAAGAGUAAGUGCUCCAAUGUUUUAGUGUUGGGGAGUCCUUAAUGUAACUUCAAAGUAC
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Structure
        10           20        30        40        50        60
AAUGGAAUGGAAAAGGAA---| A     C  U   UU     C  U      U  GUGUCU 
                     GA UCCCC AC ACU  AACAU GG GUACUU CU      U
                     CU AGGGG UG UGA  UUGUA CC CGUGAA GA      U
CAUGAAACUUCAAUGUAAUUC^ G     U  -   UU     A  U      U  GAAAAA 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-430-P1b_5p
mirBase accessionNone
Sequence 
0- ACUUUAACAUCGGUGUACUUUCU -23
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Star sequence

Xla-Mir-430-P1b_3p*
mirBase accessionNone
Sequence 
39- UAAGUGCUCCAAUGUUUUAGUGU -62
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