MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-P1

Family name MIR-430 (all species)
Seed AAGUGCU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-o29  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Dre-Mir-430-o1c  Dre-Mir-430-o1d1  Dre-Mir-430-o1d2  Dre-Mir-430-o1d3  Dre-Mir-430-o1d4  Dre-Mir-430-o1d5  Dre-Mir-430-o1d6  Dre-Mir-430-o1d7  Dre-Mir-430-o1e1  Dre-Mir-430-o1e2  Dre-Mir-430-o1e3  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xtr-Mir-430-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL864783.1: 411677-411738 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAACCACAGGAACUUAUGGGACCCCUUCUACUUUAACAUGGAGGUACUUUCUGUGACUAAAAAAAAAGUAAGUGCUUCCAUGUUUUGGUAGGAGUGACUCCUGUUCUCUUUCACCGAAUUC
Get precursor sequence
Structure
        10         20         30        40        50        60
AGAACCACAGGAACUUAU-    CCC-|       UU               U  GUGACU 
                   GGGA    CUUCUACU  AACAUGGAGGUACUU CU      A
                   UCCU    GAGGAUGG  UUGUACCUUCGUGAA GA      A
CUUAAGCCACUUUCUCUUG    CAGU^       UU               U  AAAAAA 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-430-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUUUAACAUGGAGGUACUUUCU -23
Get sequence
Mature sequence

Sha-Mir-430-P1_3p
mirBase accessionNone
Sequence 
39- UAAGUGCUUCCAUGUUUUGGUAG -62
Get sequence