MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-430-P1

Family name MIR-430 (all species)
Seed AAGUGCU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-430-o44  Laf-Mir-430-P2  Laf-Mir-430-P3  Laf-Mir-430-P4  Laf-Mir-430-P5  Laf-Mir-430-P7 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Dre-Mir-430-o1c  Dre-Mir-430-o1d1  Dre-Mir-430-o1d2  Dre-Mir-430-o1d3  Dre-Mir-430-o1d4  Dre-Mir-430-o1d5  Dre-Mir-430-o1d6  Dre-Mir-430-o1d7  Dre-Mir-430-o1e1  Dre-Mir-430-o1e2  Dre-Mir-430-o1e3  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xtr-Mir-430-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010041.1: 21848043-21848104 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUCUCCCUAGGCUGAUGGAUUUCCUUUGACUUUAACAAGGAGGUCCUUUCUGCUAUUUGUAAAAAAGUAAGUGCUUCCUUGUUUUAGUAGAAGUGAAUUCAACUAAUCUCCAGGUGAAAC
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Structure
        10          20        30        40        50        60
UUUUCUCCCUAGGCUGA--|     UC    G   UU          UC   U  GCUAUU 
                   UGGAUU  CUUU ACU  AACAAGGAGG  CUU CU      U
                   ACUUAA  GAAG UGA  UUGUUCCUUC  GAA GA      G
CAAAGUGGACCUCUAAUCA^     GU    A   UU          GU   U  AAAAAU 
120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Laf-Mir-430-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUUUAACAAGGAGGUCCUUUCU -23
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Mature sequence

Laf-Mir-430-P1_3p (predicted)
mirBase accessionNone
Sequence 
39- UAAGUGCUUCCUUGUUUUAGUAG -62
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