MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-430-P1

Family name MIR-430 (all species)
Seed AAGUGCU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-430-o36  Cmi-Mir-430-P2  Cmi-Mir-430-P3  Cmi-Mir-430-P4 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Dre-Mir-430-o1c  Dre-Mir-430-o1d1  Dre-Mir-430-o1d2  Dre-Mir-430-o1d3  Dre-Mir-430-o1d4  Dre-Mir-430-o1d5  Dre-Mir-430-o1d6  Dre-Mir-430-o1d7  Dre-Mir-430-o1e1  Dre-Mir-430-o1e2  Dre-Mir-430-o1e3  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xtr-Mir-430-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635904.1: 4109282-4109340 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGCAAAAUCUUUUUGUGUGUCGCCUGCUACGUCAACAUAGAAGCCUUUCUGUGAUAUAAUUGAGUAAGUGCUUUUAUGUUGAAGUGGCAGUGGGUGCUUGAUUCUUCAUUUUAAAAC
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Structure
        10          20        30        40         50        
GGAGCAAAAUCUUUUUGU-- UG  GC       G             -|  U  GUGAU 
                    G  UC  CUGCUAC UCAACAUAGAAGC CUU CU     A
                    C  GG  GACGGUG AGUUGUAUUUUCG GAA GA     U
CAAAAUUUUACUUCUUAGUU GU  GU       A             U^  U  GUUAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-430-P1_5p*
mirBase accessionNone
Sequence 
0- ACGUCAACAUAGAAGCCUUUCU -22
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Mature sequence

Cmi-Mir-430-P1_3p
mirBase accessionNone
Sequence 
36- UAAGUGCUUUUAUGUUGAAGUGG -59
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