Mir-430-P1

MirGeneDB ID

Bta-Mir-430-P1

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Cow (Bos taurus)

MiRBase ID

bta-mir-302b

Paralogues

Bta-Mir-430-P2 Bta-Mir-430-P3 Bta-Mir-430-P4 Bta-Mir-430-P5 Bta-Mir-430-P7

Orthologues

Aca-Mir-430-P1 Ami-Mir-430-P1 Cfa-Mir-430-P1 Cja-Mir-430-P1 Cli-Mir-430-P1 Cmi-Mir-430-P1 Cpi-Mir-430-P1 Cpo-Mir-430-P1 Dno-Mir-430-P1 Dre-Mir-430-o1a Dre-Mir-430-o1b1 Dre-Mir-430-o1b2 Dre-Mir-430-o1b3 Dre-Mir-430-o1b4 Dre-Mir-430-o1b5 Dre-Mir-430-o1b6 Dre-Mir-430-o1b7 Dre-Mir-430-o1b8 Dre-Mir-430-o1c Dre-Mir-430-o1d1 Dre-Mir-430-o1d2 Dre-Mir-430-o1d3 Dre-Mir-430-o1d4 Dre-Mir-430-o1d5 Dre-Mir-430-o1d6 Dre-Mir-430-o1d7 Dre-Mir-430-o1e1 Dre-Mir-430-o1e2 Dre-Mir-430-o1e3 Eca-Mir-430-P1 Ete-Mir-430-P1 Gga-Mir-430-P1 Hsa-Mir-430-P1 Laf-Mir-430-P1 Mdo-Mir-430-P1 Mml-Mir-430-P1 Mmr-Mir-430-P1 Mmu-Mir-430-P1 Mun-Mir-430-P1 Neu-Mir-430-P1 Oan-Mir-430-P1 Ocu-Mir-430-P1 Pab-Mir-430-P1 Rno-Mir-430-P1 Sha-Mir-430-P1 Spt-Mir-430-P1 Sto-Mir-430-P1 Tgu-Mir-430-P1 Xla-Mir-430-P1a Xla-Mir-430-P1b Xtr-Mir-430-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)

NC_037333.1: 12980223-12980284 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P1)

Mir-430-P1 NC_037333.1: 12980223-12980284 [+] UCSC Ensembl
Mir-430-P2 NC_037333.1: 12980362-12980421 [+] UCSC Ensembl
Mir-430-P3 NC_037333.1: 12980774-12980834 [+] UCSC Ensembl
Mir-430-P4 NC_037333.1: 12980950-12981012 [+] UCSC Ensembl
Mir-92-P2a NC_037333.1: 12981076-12981135 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCCACCUCUUGAGAAGAUGGACUCCCUUUAACUUUAACAUGGUAGUACUUUCUGUGACUUUUGAAAUAGUAAGUGCUUCCAUGUUUUAGUAGAAGUGAAUCCAAAUUAUGCCCCUGGAUACA

Get precursor sequence

Structure

        10          20        30        40        50        60
UCCACCUCUUGAGAAGA--|   C  C    A   UU       U       U  GUGACU 
                   UGGA UC CUUU ACU  AACAUGG AGUACUU CU      U
                   ACCU AG GAAG UGA  UUGUACC UCGUGAA GA      U
ACAUAGGUCCCCGUAUUAA^   A  U    A   UU       U       U  UAAAGU 
120       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UGUG in loop

Tissue expression

Ad	Bo	Br	Ce	Co	Co	De	Fe	He	Hy	Ir	Ki	La	Lo	Mi	No	Op	Or	Pe	Re	Su	Te

Star sequence

Bta-Mir-430-P1_5p* (predicted)

mirBase accession

None

Sequence

0- ACUUUAACAUGGUAGUACUUUCU -23

Get sequence

Mature sequence

Bta-Mir-430-P1_3p

mirBase accession

MIMAT0009280

Sequence

39- UAAGUGCUUCCAUGUUUUAGUAG -62

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Proposed targets

TargetScanVert: bta-miR-302b