MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-430-P1

Family name MIR-430 (all species)
Seed AAGUGCU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-302b
Paralogues Aca-Mir-430-P3 
Orthologues Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Dre-Mir-430-o1c  Dre-Mir-430-o1d1  Dre-Mir-430-o1d2  Dre-Mir-430-o1d3  Dre-Mir-430-o1d4  Dre-Mir-430-o1d5  Dre-Mir-430-o1d6  Dre-Mir-430-o1d7  Dre-Mir-430-o1e1  Dre-Mir-430-o1e2  Dre-Mir-430-o1e3  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xtr-Mir-430-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 5: 142962983-142963042 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P1)		 Mir-430-P1 5: 142962983-142963042 [+] UCSC Ensembl
Mir-92-P2a 5: 142964152-142964211 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAGGGGAAUCUGCAGUAUGGACUGCUUCUACUUUAACAUGGAGGUGCUUUCUGUGCAUAUAAAAAGUAAGUGCUUCCAUGUUUUAGUAGAGGUGAAUCCUGAACUCACUCUCAGUUUAC
Get precursor sequence
Structure
        10         20         30        40        50         
AUAGGGGAAUCUGCAGUAU-   CU-|        UU          UG   U  GUGCA 
                    GGA   GCUUCUACU  AACAUGGAGG  CUU CU     U
                    CCU   UGGAGAUGA  UUGUACCUUC  GAA GA     A
CAUUUGACUCUCACUCAAGU   AAG^        UU          GU   U  AAAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-430-P1_5p*
mirBase accessionNone
Sequence 
0- ACUUUAACAUGGAGGUGCUUUCU -23
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Mature sequence

Aca-Mir-430-P1_3p
mirBase accessionMIMAT0021919
Sequence 
37- UAAGUGCUUCCAUGUUUUAGUAG -60
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