Mir-430-P1

MirGeneDB ID

Hsa-Mir-430-P1

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-302b

Paralogues

Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9 Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12a Hsa-Mir-430-P12b Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16a Hsa-Mir-430-P16b Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27 Hsa-Mir-430-P28 Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P29c Hsa-Mir-430-P30 Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P32 Hsa-Mir-430-P33a Hsa-Mir-430-P33b Hsa-Mir-430-P34a Hsa-Mir-430-P34b Hsa-Mir-430-P35 Hsa-Mir-430-P36 Hsa-Mir-430-P37a Hsa-Mir-430-P37b Hsa-Mir-430-P37c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P40a Hsa-Mir-430-P40b Hsa-Mir-430-P41a Hsa-Mir-430-P41b

Orthologues

Aca-Mir-430-P1 Ami-Mir-430-P1 Bta-Mir-430-P1 Cfa-Mir-430-P1 Cja-Mir-430-P1 Cli-Mir-430-P1 Cmi-Mir-430-P1 Cpi-Mir-430-P1 Cpo-Mir-430-P1 Dno-Mir-430-P1 Dre-Mir-430-o1a Dre-Mir-430-o1b1 Dre-Mir-430-o1b2 Dre-Mir-430-o1b3 Dre-Mir-430-o1b4 Dre-Mir-430-o1b5 Dre-Mir-430-o1b6 Dre-Mir-430-o1b7 Dre-Mir-430-o1b8 Dre-Mir-430-o1c Dre-Mir-430-o1d1 Dre-Mir-430-o1d2 Dre-Mir-430-o1d3 Dre-Mir-430-o1d4 Dre-Mir-430-o1d5 Dre-Mir-430-o1d6 Dre-Mir-430-o1d7 Dre-Mir-430-o1e1 Dre-Mir-430-o1e2 Dre-Mir-430-o1e3 Eca-Mir-430-P1 Ete-Mir-430-P1 Gga-Mir-430-P1 Laf-Mir-430-P1 Mdo-Mir-430-P1 Mml-Mir-430-P1 Mmr-Mir-430-P1 Mmu-Mir-430-P1 Mun-Mir-430-P1 Neu-Mir-430-P1 Oan-Mir-430-P1 Ocu-Mir-430-P1 Pab-Mir-430-P1 Rno-Mir-430-P1 Sha-Mir-430-P1 Spt-Mir-430-P1 Sto-Mir-430-P1 Tgu-Mir-430-P1 Xla-Mir-430-P1a Xla-Mir-430-P1b Xtr-Mir-430-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr4: 112648489-112648547 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P1)

Mir-92-P2a chr4: 112647877-112647936 [-] UCSC Ensembl
Mir-430-P4 chr4: 112648006-112648066 [-] UCSC Ensembl
Mir-430-P3 chr4: 112648186-112648246 [-] UCSC Ensembl
Mir-430-P2 chr4: 112648366-112648425 [-] UCSC Ensembl
Mir-430-P1 chr4: 112648489-112648547 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AGAAGUUGUAUGUUGGGUGGGCUCCCUUCAACUUUAACAUGGAAGUGCUUUCUGUGACUUUAAAAGUAAGUGCUUCCAUGUUUUAGUAGGAGUGAAUCCAAUUUACUUCUCCAAAAUAG

Get precursor sequence

Structure

        10          20        30        40        50         
AGAAGUUGUAUGUUGGG--|  GC  C    A   UU          UG   U  GUGAC 
                   UGG  UC CUUC ACU  AACAUGGAAG  CUU CU     \
                   ACC  AG GAGG UGA  UUGUACCUUC  GAA GA     U
GAUAAAACCUCUUCAUUUA^  UA  U    A   UU          GU   U  AAAUU 
       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-430-P1_5p*

mirBase accession

MIMAT0000714

Sequence

0- ACUUUAACAUGGAAGUGCUUUCU -23

Get sequence

Proposed targets

microrna.org: MIMAT0000714
TargetScanVert: hsa-miR-302b-5p
TargetMiner: hsa-miR-302b-5p
miRDB: MIMAT0000714

Mature sequence

Hsa-Mir-430-P1_3p

mirBase accession

MIMAT0000715

Sequence

36- UAAGUGCUUCCAUGUUUUAGUAG -59

Get sequence

Proposed targets

microrna.org: MIMAT0000715
TargetScanVert: hsa-miR-302b-3p
TargetMiner: hsa-miR-302b-3p
miRDB: MIMAT0000715