Mir-430-P12b

MirGeneDB ID

Hsa-Mir-430-P12b

Family name

MIR-430 (all species)

Seed

UCUCCAA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-515-1

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9 Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12a Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16a Hsa-Mir-430-P16b Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27 Hsa-Mir-430-P28 Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P29c Hsa-Mir-430-P30 Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P32 Hsa-Mir-430-P33a Hsa-Mir-430-P33b Hsa-Mir-430-P34a Hsa-Mir-430-P34b Hsa-Mir-430-P35 Hsa-Mir-430-P36 Hsa-Mir-430-P37a Hsa-Mir-430-P37b Hsa-Mir-430-P37c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P40a Hsa-Mir-430-P40b Hsa-Mir-430-P41a Hsa-Mir-430-P41b

Orthologues

Pab-Mir-430-P12b Sha-Mir-430-o12

Node of Origin (locus)

Hominidae

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53679016-53679074 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P12b)

Mir-430-P8b chr19: 53666693-53666750 [+] UCSC Ensembl
Mir-430-P8a chr19: 53669177-53669234 [+] UCSC Ensembl
Mir-430-P9 chr19: 53671978-53672033 [+] UCSC Ensembl
Mir-430-P10 chr19: 53674230-53674289 [+] UCSC Ensembl
Mir-430-P11 chr19: 53675725-53675785 [+] UCSC Ensembl
Mir-430-P12b chr19: 53679016-53679074 [+] UCSC Ensembl
Mir-430-P13 chr19: 53679953-53680011 [+] UCSC Ensembl
Mir-430-P14 chr19: 53682173-53682233 [+] UCSC Ensembl
Mir-430-P12a chr19: 53685022-53685080 [+] UCSC Ensembl
Mir-430-P15 chr19: 53686484-53686543 [+] UCSC Ensembl
Mir-430-P16a chr19: 53688495-53688553 [+] UCSC Ensembl
Mir-430-P17 chr19: 53690895-53690953 [+] UCSC Ensembl
Mir-430-P18 chr19: 53694406-53694464 [+] UCSC Ensembl
Mir-430-P19 chr19: 53695225-53695284 [+] UCSC Ensembl
Mir-430-P20 chr19: 53697547-53697605 [+] UCSC Ensembl
Mir-430-P21 chr19: 53698400-53698458 [+] UCSC Ensembl
Mir-430-P22 chr19: 53700030-53700088 [+] UCSC Ensembl
Mir-430-P23 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P24 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P25 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P26 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P27 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P28 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P29a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P30 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P31a chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P32 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P29b chr19: 53721081-53721139 [+] UCSC Ensembl
Mir-430-P33b chr19: 53722182-53722241 [+] UCSC Ensembl
Mir-430-P34a chr19: 53725457-53725514 [+] UCSC Ensembl
Mir-430-P35 chr19: 53726928-53726982 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUUUUGGAGUGAGAAGAUCUCAUGCAGUCAUUCUCCAAAAGAAAGCACUUUCUGUUGUCUGAAAGCAGAGUGCCUUCUUUUGGAGCGUUACUGUUUGAGAAAAACCACGUUGAAGUUGA

Get precursor sequence

Structure

        10          20        30        40        50          
GUUUUGGAGUGAGAAGA--|    U     C  U           A    UU    UUGUC 
                   UCUCA GCAGU AU CUCCAAAAGAA GCAC  UCUG     \
                   AGAGU UGUCA UG GAGGUUUUCUU CGUG  AGAC     U
AGUUGAAGUUGCACCAAAA^    U     U  C           C    --    GAAAG 
       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Bo	Bo	Bo	Br	Br	Ce	Co	Fo	He	Ki	Li	Li	Lu	Pa	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-430-P12b_5p

mirBase accession

MIMAT0002826

Sequence

0- UUCUCCAAAAGAAAGCACUUUCUG -24

Get sequence

Proposed targets

microrna.org: MIMAT0002826
TargetScanVert: hsa-miR-515-5p
TargetMiner: hsa-miR-515-5p
miRDB: MIMAT0002826

Star sequence

Hsa-Mir-430-P12b_3p*

mirBase accession

MIMAT0002827

Sequence

37- GAGUGCCUUCUUUUGGAGCGUU -59

Get sequence

Proposed targets

microrna.org: MIMAT0002827
TargetScanVert: hsa-miR-515-3p
TargetMiner: hsa-miR-515-3p
miRDB: MIMAT0002827