Mir-430-P6

MirGeneDB ID

Hsa-Mir-430-P6

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-372

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9a Hsa-Mir-430-P9b Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12 Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16 Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27a Hsa-Mir-430-P27b Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P33 Hsa-Mir-430-P34 Hsa-Mir-430-P35a Hsa-Mir-430-P35b Hsa-Mir-430-P35c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P41 Hsa-Mir-430-P42 Hsa-Mir-430-P43 Hsa-Mir-430-P44 Hsa-Mir-430-P45 Hsa-Mir-430-P46 Hsa-Mir-430-P47 Hsa-Mir-430-P48 Hsa-Mir-430-P49 Hsa-Mir-430-P50

Orthologues

Dno-Mir-430-P6 Mml-Mir-430-P6 Mmu-Mir-430-P6 Rno-Mir-430-P6a Rno-Mir-430-P6b Xla-Mir-430-o6a Xla-Mir-430-o6b Xtr-Mir-430-o6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53787895-53787953 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P6)

Mir-430-P39 chr19: 53739348-53739407 [+] UCSC Ensembl
Mir-430-P35c chr19: 53741332-53741390 [+] UCSC Ensembl
Mir-430-P27a chr19: 53742528-53742587 [+] UCSC Ensembl
Mir-430-P29a chr19: 53748650-53748710 [+] UCSC Ensembl
Mir-430-P41 chr19: 53751226-53751285 [+] UCSC Ensembl
Mir-430-P15 chr19: 53752410-53752470 [+] UCSC Ensembl
Mir-430-P48 chr19: 53754031-53754089 [+] UCSC Ensembl
Mir-430-P31a chr19: 53756756-53756818 [+] UCSC Ensembl
Mir-430-P50 chr19: 53758246-53758304 [+] UCSC Ensembl
Mir-430-P31b chr19: 53761148-53761210 [+] UCSC Ensembl
Mir-430-P16 chr19: 53762358-53762418 [+] UCSC Ensembl
Mir-430-P5 chr19: 53787680-53787738 [+] UCSC Ensembl
Mir-430-P6 chr19: 53787895-53787953 [+] UCSC Ensembl
Mir-430-P7 chr19: 53788710-53788770 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCUUGCAGAUGGAGCUGCUCACCCUGUGGGCCUCAAAUGUGGAGCACUAUUCUGAUGUCCAAGUGGAAAGUGCUGCGACAUUUGAGCGUCACCGGUGACGCCCAUAUCAACGGAUGCCG

Get precursor sequence

Structure

        10           20        30         40         50         
UCUUGCAGAUGGAGCUGC---|    CU    G -         - G      A    GAUGU 
                     UCACC  GUGG C CUCAAAUGU G AGCACU UUCU     \
                     AGUGG  CACU G GAGUUUACA C UCGUGA AAGG     C
GCCGUAGGCAACUAUACCCGC^    C-    - C         G G      -    UGAAC 
       110       100         90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	2-	2-	2-	2-	2-	2-	2-	2-	2-	2-	2-	3-	3-	3-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	5-	5-	5-	5-	5-	5-	5-	6-	6-	6-	6-	6-

Star sequence

Hsa-Mir-430-P6_5p*

mirBase accession

MIMAT0026484

Sequence

0- CCUCAAAUGUGGAGCACUAUUCU -23

Get sequence

Proposed targets

TargetScanVert: hsa-miR-372-5p
miRDB: MIMAT0026484

Mature sequence

Hsa-Mir-430-P6_3p

mirBase accession

MIMAT0000724

Sequence

36- AAAGUGCUGCGACAUUUGAGCGU -59

Get sequence

Proposed targets

microrna.org: MIMAT0000724
TargetScanVert: hsa-miR-372-3p
miRDB: MIMAT0000724