| MirGeneDB ID | Cja-Mir-430-P6 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAAGUGC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P7 Cja-Mir-430-P8 Cja-Mir-430-P9 Cja-Mir-430-P10 Cja-Mir-430-P11 |
| Orthologues | Dno-Mir-430-P6 Eca-Mir-430-P6 Hsa-Mir-430-P6 Mml-Mir-430-P6 Mmr-Mir-430-P6 Mmu-Mir-430-P6 Pab-Mir-430-P6 Rno-Mir-430-P6a Rno-Mir-430-P6b Xla-Mir-430-o6a Xla-Mir-430-o6b Xtr-Mir-430-o6 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45626413-45626471 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGUUGCAGGUGGGGCUGCUCACCCGGUGGGCCUCAAAUGUCGGGCACUAUUCCGGUGUCCAUGUGGAAAGUGCUGCAACAUUUGAGCAUCACCGGUGACGCCCGGGUCGACAGAUGCCGGet precursor sequence |
| Structure | 10 20 30 40 50 UGUUGCAGGUGGGGCUGC---| C GC CG- A GGUGU UCACC GGUGG CUCAAAUGU GGCACU UUCC \ AGUGG CCACU GAGUUUACA UCGUGA AAGG C GCCGUAGACAGCUGGGCCCGC^ - AC ACG - UGUAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-430-P6_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUCAAAUGUCGGGCACUAUUCC -23
Get sequence
|
| Mature sequence | Cja-Mir-430-P6_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- GAAAGUGCUGCAACAUUUGAGCAU -59
Get sequence
|
