Mir-430-P6

MirGeneDB ID

Mml-Mir-430-P6

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-372

Paralogues

Mml-Mir-430-P1 Mml-Mir-430-P2 Mml-Mir-430-P3 Mml-Mir-430-P4 Mml-Mir-430-P5 Mml-Mir-430-P7 Mml-Mir-430-P8 Mml-Mir-430-P9 Mml-Mir-430-P10 Mml-Mir-430-P12c Mml-Mir-430-P12d Mml-Mir-430-P12e Mml-Mir-430-P14a Mml-Mir-430-P14b Mml-Mir-430-P15 Mml-Mir-430-P16 Mml-Mir-430-P17 Mml-Mir-430-P18 Mml-Mir-430-P20 Mml-Mir-430-P21 Mml-Mir-430-P22 Mml-Mir-430-P24 Mml-Mir-430-P25 Mml-Mir-430-P27a Mml-Mir-430-P27b Mml-Mir-430-P28 Mml-Mir-430-P29a Mml-Mir-430-P29b-v1 Mml-Mir-430-P29b-v2 Mml-Mir-430-P29c Mml-Mir-430-P30 Mml-Mir-430-P31 Mml-Mir-430-P32a1 Mml-Mir-430-P32a2 Mml-Mir-430-P32b Mml-Mir-430-P33 Mml-Mir-430-P34 Mml-Mir-430-P36a1 Mml-Mir-430-P36a2 Mml-Mir-430-P36b Mml-Mir-430-P36c Mml-Mir-430-P38 Mml-Mir-430-P39 Mml-Mir-430-P42 Mml-Mir-430-P43 Mml-Mir-430-P44 Mml-Mir-430-P45a Mml-Mir-430-P45b

Orthologues

Cja-Mir-430-P6 Dno-Mir-430-P6 Eca-Mir-430-P6 Hsa-Mir-430-P6 Mmr-Mir-430-P6 Mmu-Mir-430-P6 Pab-Mir-430-P6 Rno-Mir-430-P6a Rno-Mir-430-P6b Xla-Mir-430-o6a Xla-Mir-430-o6b Xtr-Mir-430-o6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014354.1: 53555552-53555610 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P6)

Mir-430-P32a2 CM014354.1: 53507505-53507564 [+] UCSC Ensembl
Mir-430-P29c CM014354.1: 53509478-53509536 [+] UCSC Ensembl
Mir-430-P33 CM014354.1: 53510678-53510743 [+] UCSC Ensembl
Mir-430-P44 CM014354.1: 53516856-53516916 [+] UCSC Ensembl
Mir-430-P31 CM014354.1: 53518551-53518611 [+] UCSC Ensembl
Mir-430-P39 CM014354.1: 53520125-53520184 [+] UCSC Ensembl
Mir-430-P32b CM014354.1: 53522610-53522669 [+] UCSC Ensembl
Mir-430-P45a CM014354.1: 53524156-53524217 [+] UCSC Ensembl
Mir-430-P45b CM014354.1: 53528832-53528893 [+] UCSC Ensembl
Mir-430-P5 CM014354.1: 53555343-53555404 [+] UCSC Ensembl
Mir-430-P6 CM014354.1: 53555552-53555610 [+] UCSC Ensembl
Mir-430-P7 CM014354.1: 53556259-53556319 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCUUGCAGGUAGAGCUGCUCACCCUGUGAUCCUCAAAUGUGGAGCACUAUUCUGAUGUCCAAGUGGAAAGUGCUGCGACAUUUGAGCGUCACCGGUGACGCCCAUACCAACGGAUGCCG

Get precursor sequence

Structure

        10           20        30        40         50         
UCUUGCAGGUAGAGCUGC---|    CU     C         - G      A    GAUGU 
                     UCACC  GUGAU CUCAAAUGU G AGCACU UUCU     \
                     AGUGG  CACUG GAGUUUACA C UCGUGA AAGG     C
GCCGUAGGCAACCAUACCCGC^    C-     C         G G      -    UGAAC 
       110       100         90        80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-430-P6_5p*

mirBase accession

MIMAT0026858

Sequence

0- CCUCAAAUGUGGAGCACUAUUCU -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-372-5p

Mature sequence

Mml-Mir-430-P6_3p

mirBase accession

MIMAT0006298

Sequence

36- AAAGUGCUGCGACAUUUGAGCGU -59

Get sequence

Proposed targets

TargetScanVert: mml-miR-372-3p