MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-430-P36a1

Family name MIR-430 (all species)
Seed UCUAGAG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-518d-2
Paralogues Mml-Mir-430-P1  Mml-Mir-430-P2  Mml-Mir-430-P3  Mml-Mir-430-P4  Mml-Mir-430-P5  Mml-Mir-430-P6  Mml-Mir-430-P7  Mml-Mir-430-P8  Mml-Mir-430-P9  Mml-Mir-430-P10  Mml-Mir-430-P12c  Mml-Mir-430-P12d  Mml-Mir-430-P12e  Mml-Mir-430-P14a  Mml-Mir-430-P14b  Mml-Mir-430-P15  Mml-Mir-430-P16  Mml-Mir-430-P17  Mml-Mir-430-P18  Mml-Mir-430-P20  Mml-Mir-430-P21  Mml-Mir-430-P22  Mml-Mir-430-P24  Mml-Mir-430-P25  Mml-Mir-430-P27a  Mml-Mir-430-P27b  Mml-Mir-430-P28  Mml-Mir-430-P29a  Mml-Mir-430-P29b-v1  Mml-Mir-430-P29b-v2  Mml-Mir-430-P29c  Mml-Mir-430-P30  Mml-Mir-430-P31  Mml-Mir-430-P32a1  Mml-Mir-430-P32a2  Mml-Mir-430-P32b  Mml-Mir-430-P33  Mml-Mir-430-P34  Mml-Mir-430-P36a2  Mml-Mir-430-P36b  Mml-Mir-430-P36c  Mml-Mir-430-P38  Mml-Mir-430-P39  Mml-Mir-430-P42  Mml-Mir-430-P43  Mml-Mir-430-P44  Mml-Mir-430-P45a  Mml-Mir-430-P45b 
Orthologues Cmi-Mir-430-o36  Hsa-Mir-430-P36  Pab-Mir-430-P36  Pbv-Mir-430-o36 
Node of Origin (locus) M. mulatta
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014354.1: 53487417-53487475 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P36a1)		 Mir-430-P12c CM014354.1: 53440288-53440350 [+] UCSC Ensembl
Mir-430-P42 CM014354.1: 53444529-53444589 [+] UCSC Ensembl
Mir-430-P17 CM014354.1: 53449026-53449085 [+] UCSC Ensembl
Mir-430-P18 CM014354.1: 53453376-53453434 [+] UCSC Ensembl
Mir-430-P15 CM014354.1: 53454188-53454248 [+] UCSC Ensembl
Mir-430-P20 CM014354.1: 53456559-53456619 [+] UCSC Ensembl
Mir-430-P21 CM014354.1: 53457405-53457463 [+] UCSC Ensembl
Mir-430-P22 CM014354.1: 53459381-53459439 [+] UCSC Ensembl
Mir-430-P14a CM014354.1: 53460554-53460614 [+] UCSC Ensembl
Mir-430-P24 CM014354.1: 53462909-53462967 [+] UCSC Ensembl
Mir-430-P14b CM014354.1: 53467690-53467750 [+] UCSC Ensembl
Mir-430-P28 CM014354.1: 53472112-53472171 [+] UCSC Ensembl
Mir-430-P29a CM014354.1: 53474125-53474185 [+] UCSC Ensembl
Mir-430-P30 CM014354.1: 53475275-53475339 [+] UCSC Ensembl
Mir-430-P32a1 CM014354.1: 53480586-53480645 [+] UCSC Ensembl
Mir-430-P36a1 CM014354.1: 53487417-53487475 [+] UCSC Ensembl
Mir-430-P36b CM014354.1: 53490070-53490128 [+] UCSC Ensembl
Mir-430-P36a2 CM014354.1: 53491934-53491992 [+] UCSC Ensembl
Mir-430-P36c CM014354.1: 53494528-53494589 [+] UCSC Ensembl
Mir-430-P34 CM014354.1: 53504275-53504337 [+] UCSC Ensembl
Mir-430-P32a2 CM014354.1: 53507505-53507564 [+] UCSC Ensembl
Mir-430-P29c CM014354.1: 53509478-53509536 [+] UCSC Ensembl
Mir-430-P33 CM014354.1: 53510678-53510743 [+] UCSC Ensembl
Mir-430-P44 CM014354.1: 53516856-53516916 [+] UCSC Ensembl
Mir-430-P31 CM014354.1: 53518551-53518611 [+] UCSC Ensembl
Mir-430-P39 CM014354.1: 53520125-53520184 [+] UCSC Ensembl
Mir-430-P32b CM014354.1: 53522610-53522669 [+] UCSC Ensembl
Mir-430-P45a CM014354.1: 53524156-53524217 [+] UCSC Ensembl
Mir-430-P45b CM014354.1: 53528832-53528893 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGGAGCAAGAAGAUCUCAUGAUGUGACUCUCUAGAGGAAAGCGCUUACUGUUGGCUAAAAAAAUAGGAAGCGCUUCUCUUUAGAGUGUUACGCUUUGAGAAAAGCAACGCGGAUCUU
Get precursor sequence
Structure
        10          20        30        40        50         
UCUGGAGCAAGAAGAUC--|  UGA      U        GA        A   UUGGCU 
                   UCA   UGUGAC CUCUAGAG  AAGCGCUU CUG      \
                   AGU   GCAUUG GAGAUUUC  UUCGCGAA GAU      A
UUCUAGGCGCAACGAAAAG^  UUC      U        UC        G   AAAAAA 
       110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Mature sequence

Mml-Mir-430-P36a1_5p
mirBase accessionMIMAT0024355
Sequence 
0- CUCUAGAGGAAAGCGCUUACUG -22
Get sequence
Proposed targets TargetScanVert: mml-miR-518d-5p
Star sequence

Mml-Mir-430-P36a1_3p*
mirBase accessionMIMAT0027121
Sequence 
37- GGAAGCGCUUCUCUUUAGAGUG -59
Get sequence
Proposed targets TargetScanVert: mml-miR-518d-3p