MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-430-o36

Family name MIR-430 (all species)
Seed AAGUGCU
Species Burmese python (Python bivittatus)
MiRBase ID
Paralogues Pbv-Mir-430-o37  Pbv-Mir-430-o38  Pbv-Mir-430-o39 
Orthologues Cmi-Mir-430-o36  Hsa-Mir-430-P36  Mml-Mir-430-P36a1  Mml-Mir-430-P36a2  Mml-Mir-430-P36b  Mml-Mir-430-P36c  Pab-Mir-430-P36 
Node of Origin (locus) P. bivittatus
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE954489.1: 53193-53254 [+]
Precursor
(pre-Mir +30nt flank)
AUCUUGACCAAAAGCGGCCUCCUGAAGCCCACGCAGACAGUGGCACUUUCUUGUAGUAAUAAAUUCAAUUAAGUGCUAUAUUGUUUGUGUGGGAUUUGGGCCUGGCGGAGCAACAAGUCUUU
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Structure
        10        20          30          40        50         
AUCUUGACCAAAAGCGGCCU--  UG  G            --|        UCUUGUAGUA 
                      CC  AA CCCACGCAGACA  GUGGCACUU          A
                      GG  UU GGGUGUGUUUGU  UAUCGUGAA          U
UUUCUGAACAACGAGGCGGUCC  GU  A            UA^        UUAACUUAAA 
120       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
To
Star sequence

Pbv-Mir-430-o36_5p* (predicted)

mirBase accessionNone
Sequence
0- ACGCAGACAGUGGCACUUUCU -21
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Mature sequence

Pbv-Mir-430-o36_3p (predicted)

mirBase accessionNone
Sequence
39- UAAGUGCUAUAUUGUUUGUGUGG -62
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