MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-430-o37

Family name MIR-430 (all species)
Seed AAGUGCU
Species Burmese python (Python bivittatus)
MiRBase ID
Paralogues Pbv-Mir-430-o36  Pbv-Mir-430-o38  Pbv-Mir-430-o39 
Orthologues Hsa-Mir-430-P37a  Hsa-Mir-430-P37b  Hsa-Mir-430-P37c  Pab-Mir-430-P37a  Pab-Mir-430-P37b  Pab-Mir-430-P37c 
Node of Origin (locus) P. bivittatus
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE954489.1: 53544-53603 [+]
Precursor
(pre-Mir +30nt flank)
GGAGCUUCCAUCUCUCACUGACUGAGCCUUGCCCAGACAUGGGCACUUUUCUUUUUUUCUAAUCUGGAAAGUGCUUCAUUGUUUGGGUGAGGCUCUGGUUCAGGUUCCCUCUAAAUUGGA
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Structure
        10         20         30         40         50        
GGAGCUUCCAUCUCUCACU-    -      UG       -   -|         UUUUUU 
                    GACU GAGCCU  CCCAGAC AUG GGCACUUUUC      U
                    UUGG CUCGGA  GGGUUUG UAC UCGUGAAAGG      C
AGGUUAAAUCUCCCUUGGAC    U      GU       U   U^         UCUAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pbv-Mir-430-o37_5p* (predicted)

mirBase accessionNone
Sequence
0- GCCCAGACAUGGGCACUUUUC -21
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Mature sequence

Pbv-Mir-430-o37_3p

mirBase accessionNone
Sequence
37- AAAGUGCUUCAUUGUUUGGGUGA -60
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