MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-430-o39

Family name MIR-430 (all species)
Seed AAGUGCU
Species Burmese python (Python bivittatus)
MiRBase ID
Paralogues Pbv-Mir-430-o36  Pbv-Mir-430-o37  Pbv-Mir-430-o38 
Orthologues Hsa-Mir-430-P39  Mml-Mir-430-P39  Pab-Mir-430-P39 
Node of Origin (locus) P. bivittatus
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE954489.1: 53802-53862 [+]
Precursor
(pre-Mir +30nt flank)
UUUGCUGCACAACCUUCCUAGGUGGGCACUGCUCAAACUUUAGCACUUUCCUGUUCAGCCACUUAGGGUAAGUGCUACACUGUUUGGGUAGCUCCCAGCCAGGCUUUCCAAGUGUUUUAUG
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Structure
        10          20         30        40           50        
UUUGCUGCACAACCUUC--  A  -    CA          UU--        -|  UGUUCA 
                   CU GG UGGG  CUGCUCAAAC    UAGCACUU UCC      G
                   GA CC ACCC  GAUGGGUUUG    AUCGUGAA GGG      C
GUAUUUUGUGAACCUUUCG  -  G    UC          UCAC        U^  AUUCAC 
 .       110        100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
To
Star sequence

Pbv-Mir-430-o39_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUCAAACUUUAGCACUUUCC -21
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Mature sequence

Pbv-Mir-430-o39_3p (predicted)

mirBase accessionNone
Sequence
38- UAAGUGCUACACUGUUUGGGUAG -61
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