| MirGeneDB ID | Mml-Mir-430-P27b |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAAUCGC |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | |
| Paralogues | Mml-Mir-430-P1 Mml-Mir-430-P2 Mml-Mir-430-P3 Mml-Mir-430-P4 Mml-Mir-430-P5 Mml-Mir-430-P6 Mml-Mir-430-P7 Mml-Mir-430-P8 Mml-Mir-430-P9 Mml-Mir-430-P10 Mml-Mir-430-P12c Mml-Mir-430-P12d Mml-Mir-430-P12e Mml-Mir-430-P14a Mml-Mir-430-P14b Mml-Mir-430-P15 Mml-Mir-430-P16 Mml-Mir-430-P17 Mml-Mir-430-P18 Mml-Mir-430-P20 Mml-Mir-430-P21 Mml-Mir-430-P22 Mml-Mir-430-P24 Mml-Mir-430-P25 Mml-Mir-430-P27a Mml-Mir-430-P28 Mml-Mir-430-P29a Mml-Mir-430-P29b-v1 Mml-Mir-430-P29b-v2 Mml-Mir-430-P29c Mml-Mir-430-P30 Mml-Mir-430-P31 Mml-Mir-430-P32a1 Mml-Mir-430-P32a2 Mml-Mir-430-P32b Mml-Mir-430-P33 Mml-Mir-430-P34 Mml-Mir-430-P36a1 Mml-Mir-430-P36a2 Mml-Mir-430-P36b Mml-Mir-430-P36c Mml-Mir-430-P38 Mml-Mir-430-P39 Mml-Mir-430-P42 Mml-Mir-430-P43 Mml-Mir-430-P44 Mml-Mir-430-P45a Mml-Mir-430-P45b |
| Orthologues | Hsa-Mir-430-P27 Pab-Mir-430-P27 Sha-Mir-430-o27 |
| Node of Origin (locus) | M. mulatta |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014354.1: 53525794-53525853 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-430-P27b) |
Mir-430-P32a1
CM014354.1: 53480586-53480645 [+]
UCSC
Ensembl
Mir-430-P36a1 CM014354.1: 53487417-53487475 [+] UCSC Ensembl Mir-430-P36b CM014354.1: 53490070-53490128 [+] UCSC Ensembl Mir-430-P36a2 CM014354.1: 53491934-53491992 [+] UCSC Ensembl Mir-430-P36c CM014354.1: 53494528-53494589 [+] UCSC Ensembl Mir-430-P34 CM014354.1: 53504275-53504337 [+] UCSC Ensembl Mir-430-P32a2 CM014354.1: 53507505-53507564 [+] UCSC Ensembl Mir-430-P29c CM014354.1: 53509478-53509536 [+] UCSC Ensembl Mir-430-P33 CM014354.1: 53510678-53510743 [+] UCSC Ensembl Mir-430-P44 CM014354.1: 53516856-53516916 [+] UCSC Ensembl Mir-430-P31 CM014354.1: 53518551-53518611 [+] UCSC Ensembl Mir-430-P39 CM014354.1: 53520125-53520184 [+] UCSC Ensembl Mir-430-P32b CM014354.1: 53522610-53522669 [+] UCSC Ensembl Mir-430-P45a CM014354.1: 53524156-53524217 [+] UCSC Ensembl Mir-430-P45b CM014354.1: 53528832-53528893 [+] UCSC Ensembl Mir-430-P5 CM014354.1: 53555343-53555404 [+] UCSC Ensembl Mir-430-P6 CM014354.1: 53555552-53555610 [+] UCSC Ensembl Mir-430-P7 CM014354.1: 53556259-53556319 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUGGAGCAAGAAGAUCUCAUGCUGUGACUCUCUGGACAGAAGCGGUUUCUGUUGUCUGAAAGAAAACAAAUCGCUUCUGUCUAGAGUGUUUCGGUUUGAGAAAAGCGACGUUGAAGUUGGet precursor sequence |
| Structure | 10 20 30 40 50 GCUGGAGCAAGAAGAUC---| U U U UC GUCUG UCA GCUG GAC CUCUGGACAGAAGCGGUU UGUU \ AGU UGGC UUG GAGAUCUGUCUUCGCUAA ACAA A GUUGAAGUUGCAGCGAAAAG^ U U U -- AAGAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Mml-Mir-430-P27b_5p* |
| mirBase accession | None |
| Sequence |
0- CUCUGGACAGAAGCGGUUUCUGUU -24
Get sequence
|
| Mature sequence | Mml-Mir-430-P27b_3p |
| mirBase accession | None |
| Sequence |
37- CAAAUCGCUUCUGUCUAGAGUGU -60
Get sequence
|
