| MirGeneDB ID | Cja-Mir-430-P10 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | UUCAAGC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P7 Cja-Mir-430-P8 Cja-Mir-430-P9 Cja-Mir-430-P11 |
| Orthologues | Hsa-Mir-430-P10 Mml-Mir-430-P10 Pab-Mir-430-P10 Sha-Mir-430-o10 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45465263-45465320 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUCCUUGGGGAGUGAUGCUCAGUCUGUGAUUUCAAGCUGGGGGUGCUUUUCUGUGACUGGUGAAAAGCACCUGCAGGGCUUGAACCCCACAGUUUGAGAGCAAGCAUCUAAGGAGGUGet precursor sequence |
| Structure | 10 20 30 40 50 CCUCCUUGGGGAGUGAUG- U AU- --| G UGUG CUCAG CUGUG UUCAAGC UG GGGUGCUUUUC A GAGUU GACAC AAGUUCG AC UCCACGAAAAG C UGGAGGAAUCUACGAACGA U CCC GG^ G UGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Cja-Mir-430-P10_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUCAAGCUGGGGGUGCUUUUC -22
Get sequence
|
| Star sequence | Cja-Mir-430-P10_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- AAAGCACCUGCAGGGCUUGAACCC -58
Get sequence
|
