| MirGeneDB ID | Cja-Mir-430-P8 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AGUGCCG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-430-P1 Cja-Mir-430-P2 Cja-Mir-430-P3 Cja-Mir-430-P4 Cja-Mir-430-P5 Cja-Mir-430-P6 Cja-Mir-430-P7 Cja-Mir-430-P9 Cja-Mir-430-P10 Cja-Mir-430-P11 |
| Orthologues | Dno-Mir-430-P8 Ete-Mir-430-P8 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Mml-Mir-430-P8 Mmr-Mir-430-P8 Pab-Mir-430-P8 Xla-Mir-430-o8a Xla-Mir-430-o8b Xtr-Mir-430-o8 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 45463661-45463719 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUGCAGGGAGAGGGCUUCUCAGUCUGUGGCACUCAGCCCUGAGGGCACUUUCUGGUGUAAGAAACGAAAGUGCCGUCAAGGCUGAGAGCCAAUGACUGAGGCAAGCACCGUGGUGGGUGGet precursor sequence |
| Structure | 10 20 30 40 50 AUGCAGGGAGAGGGCUU--| UG A C G UGGUGU CUCAGUC UGGC CUCAGCC UGA GGCACUUUC \ GAGUCAG ACCG GAGUCGG ACU CCGUGAAAG A GUGGGUGGUGCCACGAACG^ UA A A G CAAAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-430-P8_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUCAGCCCUGAGGGCACUUUC -22
Get sequence
|
| Mature sequence | Cja-Mir-430-P8_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AAGUGCCGUCAAGGCUGAGAGC -59
Get sequence
|
