MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-430-P8

Family name MIR-430 (all species)
Seed AGUGCUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-512
Paralogues Dno-Mir-430-P1  Dno-Mir-430-P2  Dno-Mir-430-P3  Dno-Mir-430-P4  Dno-Mir-430-P5  Dno-Mir-430-P6 
Orthologues Ete-Mir-430-P8  Hsa-Mir-430-P8a  Hsa-Mir-430-P8b  Mml-Mir-430-P8  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xtr-Mir-430-o8 
Node of Origin (locus) Eutheria
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH570335: 73655-73715 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P8)
Mir-430-P8 JH570335: 73655-73715 [+] UCSC Ensembl
Mir-430-P5 JH570335: 104581-104641 [+] UCSC Ensembl
Mir-430-P6 JH570335: 104769-104828 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUGGACAACGAUUAUCUCAGUCCUGUGGCACUCAGCCCUGGGGGCACUUUCUGGUUCCUGAAUGAGGAAAGUGCUGCCAGAGUUGAGUAUCACUGGCUGGAGAAGAGCCAUCAGAUACUG
Get precursor sequence
Structure
        10           20        30        40        50          
UAUGGACAACGAUUAUC---|     CU   GC       C    G         UGGUUCC 
                    UCAGUC  GUG  ACUCAGC CUGG GGCACUUUC       \
                    GGUCGG  CAC  UGAGUUG GACC UCGUGAAAG       U
GUCAUAGACUACCGAGAAGA^     U-   UA       A    G         GAGUAAG 
 .       110       100         90        80        70
Deep sequencing
Go to detailed chart
CommentThe Dicer cut in tenrec is +1 relative to human generating a seed-shifted mature 3p read. Armadillo the only other taxon with reads from this miRNA expresses both versions equally but lowly and thus it is unclear which version predominates in vivo. The human version of the cut is annotated here.
3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Dno-Mir-430-P8_5p* (predicted)

mirBase accessionMIMAT0047961
Sequence
0- ACUCAGCCCUGGGGGCACUUUC -22
Get sequence
Mature sequence

Dno-Mir-430-P8_3p

mirBase accessionMIMAT0047962
Sequence
39- AAGUGCUGCCAGAGUUGAGUAU -61
Get sequence