MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-P1a

Family name MIR-430 (all species)
Seed CUUUAAC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Spt-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xtr-Mir-430-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030724.1: 61970687-61970748 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUUAAUGGAAGAGGAAGAUUACCCCACUACUUUAACAUCGGUGUACUUUCUGUGUCUUUAAAAAGGGUAAGUGCUCCAAUGUUUUAGUAUUGGGGAAUCCUUAAUGCAACUUCAAAGUAC
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Structure
        10           20        30        40        50           
CAAUUAAUGGAAGAGGAA---|   A     C    UU     C  U      -   GUGUCU 
                     GAUU CCCCA UACU  AACAU GG GUACUU UCU      \
                     CUAA GGGGU AUGA  UUGUA CC CGUGAA GGG      U
CAUGAAACUUCAACGUAAUUC^   -     U    UU     A  U      U   AAAAAU 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-430-P1a_5p
mirBase accessionNone
Sequence 
0- ACUUUAACAUCGGUGUACUUUCU -23
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Star sequence

Xla-Mir-430-P1a_3p*
mirBase accessionNone
Sequence 
39- UAAGUGCUCCAAUGUUUUAGUAU -62
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