MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-o5s

Family name MIR-430 (all species)
Seed AAGUGCU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Bta-Mir-430-P5  Cja-Mir-430-P5  Cpo-Mir-430-P5  Dno-Mir-430-P5  Eca-Mir-430-P5  Ete-Mir-430-P5  Hsa-Mir-430-P5  Laf-Mir-430-P5  Mml-Mir-430-P5  Ocu-Mir-430-P5  Pab-Mir-430-P5 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NW_016694811.1: 4533432-4533493 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUUUUCAGUGCAAAGCCAAUUUUACUUUACCCAAAACUCGGCCCUCUCUUGUGUUUCAAUUAUUAAGAAAGUGCUUUUUGUUUUGGGCAUUGUAUGUAUUGGGCACUCCAUCUUGAAAUC
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Structure
        10         20         30        40          50         
GAUUUUUCAGUGCAAAG-     UU-   UUUA        UC--|  C  C   UGUGUUU 
                  CCAAU   UAC    CCCAAAAC    GGC CU UCU       C
                  GGUUA   AUG    GGGUUUUG    UCG GA AGA       A
CUAAAGUUCUACCUCACG     UGU   UUAC        UUUU^  U  A   AUUAUUA 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Em
Star sequence

Xla-Mir-430-o5s_5p*
mirBase accessionNone
Sequence 
0- ACCCAAAACUCGGCCCUCUCU -21
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Mature sequence

Xla-Mir-430-o5s_3p
mirBase accessionNone
Sequence 
39- AAAGUGCUUUUUGUUUUGGGCAU -62
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