Mir-430-o7b

MirGeneDB ID

Xla-Mir-430-o7b

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

African clawed frog (Xenopus laevis)

MiRBase ID

xla-mir-428a-2

Paralogues

Xla-Mir-430-o4a Xla-Mir-430-o4b Xla-Mir-430-o5o1 Xla-Mir-430-o5o2 Xla-Mir-430-o5p1 Xla-Mir-430-o5p2 Xla-Mir-430-o5q1 Xla-Mir-430-o5q2 Xla-Mir-430-o5r Xla-Mir-430-o5s Xla-Mir-430-o6a Xla-Mir-430-o6b Xla-Mir-430-o7a Xla-Mir-430-o8a Xla-Mir-430-o8b Xla-Mir-430-o9 Xla-Mir-430-P1a Xla-Mir-430-P1b Xla-Mir-430-P3a Xla-Mir-430-P3b

Orthologues

Bta-Mir-430-P7 Cja-Mir-430-P7 Eca-Mir-430-P7 Hsa-Mir-430-P7 Laf-Mir-430-P7 Mml-Mir-430-P7 Mmr-Mir-430-P7 Mmu-Mir-430-P7b Pab-Mir-430-P7 Rno-Mir-430-P7b Xtr-Mir-430-o7

Node of Origin (locus)

X. laevis

Node of Origin (family)

Vertebrata

Genome context
(GCF_001663975.1_XLA_v2)

NC_030739.1: 26162871-26162929 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUCCAAGUGUCCUGUCCUGUGUUCACAUAUCGGCCAAACUGGGGCGCUGCCACUGUAGCUUGGGGUAAGUGCUCUCUAGUUCGGUUGCUGUGUGUGCAGGAAUAGCAUGUGAGGGGCAU

Get precursor sequence

Structure

        10          20        30        40           50       
GUCCAAGUGUCCUGUCCUG--   U      U     A      - -    -|   ACUGU 
                     UGU CACAUA CGGCC AACUGG G GCGC UGCC     A
                     ACG GUGUGU GUUGG UUGAUC C CGUG AUGG     G
UACGGGGAGUGUACGAUAAGG   U      C     C      U U    A^   GGUUC 
       110       100        90        80        70        60