Mir-430-P7

MirGeneDB ID

Eca-Mir-430-P7

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Horse (Equus caballus)

MiRBase ID

Paralogues

Eca-Mir-430-P1 Eca-Mir-430-P2 Eca-Mir-430-P3 Eca-Mir-430-P4 Eca-Mir-430-P5 Eca-Mir-430-P6

Orthologues

Bta-Mir-430-P7 Cfa-Mir-430-P7d1 Cfa-Mir-430-P7d2 Cja-Mir-430-P7 Hsa-Mir-430-P7 Laf-Mir-430-P7 Mml-Mir-430-P7 Mmr-Mir-430-P7 Mmu-Mir-430-P7a Mmu-Mir-430-P7b Mmu-Mir-430-P7c Pab-Mir-430-P7 Rno-Mir-430-P7a Rno-Mir-430-P7b Rno-Mir-430-P7c Xla-Mir-430-o7a Xla-Mir-430-o7b Xtr-Mir-430-o7

Node of Origin (locus)

Eutheria

Node of Origin (family)

Vertebrata

Genome context
(GCA_002863925.1_EquCab3.0)

CM009157.1: 23263641-23263698 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P7)

Mir-430-P5 CM009157.1: 23262827-23262886 [+] UCSC Ensembl
Mir-430-P6 CM009157.1: 23263034-23263093 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GGAACCGGUUCCAAGCGCUCAGGCUGUGAGACUCAAAAUGGGGGCGCUUGCCGUGUUCGUGACAGGAAAGUGCUUUCAUUUUGUGUGUCCCCGUUUGAGGAGAGCAUCUCAGGAGCUG

Get precursor sequence

Structure

        10          20        30        40        50        
GGAACCGGUUCCAAGCG--|      UGU  G  U       GG       G  GUGUU 
                   CUCAGGC   GA AC CAAAAUG  GGCGCUU CC     C
                   GAGUUUG   CU UG GUUUUAC  UCGUGAA GG     G
GUCGAGGACUCUACGAGAG^      CCC  G  U       UU       A  ACAGU 
      110       100        90        80        70        60

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er

Star sequence

Eca-Mir-430-P7_5p* (predicted)

mirBase accession

None

Sequence

0- ACUCAAAAUGGGGGCGCUUGCC -22

Get sequence

Mature sequence

Eca-Mir-430-P7_3p

mirBase accession

None

Sequence

36- AAAGUGCUUUCAUUUUGUGUGU -58

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