MirGeneDB 3.0
MirGeneDB ID

Spt-Mir-430-P1

Family name MIR-430 (all species)
Seed AAGUGCU
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-430-P2  Spt-Mir-430-P3  Spt-Mir-430-P4 
Orthologues Aca-Mir-430-P1  Ami-Mir-430-P1  Bta-Mir-430-P1  Cfa-Mir-430-P1  Cja-Mir-430-P1  Cli-Mir-430-P1  Cmi-Mir-430-P1  Cpi-Mir-430-P1  Cpo-Mir-430-P1  Dno-Mir-430-P1  Dre-Mir-430-o1a  Dre-Mir-430-o1b1  Dre-Mir-430-o1b2  Dre-Mir-430-o1b3  Dre-Mir-430-o1b4  Dre-Mir-430-o1b5  Dre-Mir-430-o1b6  Dre-Mir-430-o1b7  Dre-Mir-430-o1b8  Dre-Mir-430-o1c  Dre-Mir-430-o1d1  Dre-Mir-430-o1d2  Dre-Mir-430-o1d3  Dre-Mir-430-o1d4  Dre-Mir-430-o1d5  Dre-Mir-430-o1d6  Dre-Mir-430-o1d7  Dre-Mir-430-o1e1  Dre-Mir-430-o1e2  Dre-Mir-430-o1e3  Eca-Mir-430-P1  Ete-Mir-430-P1  Gga-Mir-430-P1  Hsa-Mir-430-P1  Laf-Mir-430-P1  Mdo-Mir-430-P1  Mml-Mir-430-P1  Mmr-Mir-430-P1  Mmu-Mir-430-P1  Mun-Mir-430-P1  Neu-Mir-430-P1  Oan-Mir-430-P1  Ocu-Mir-430-P1  Pab-Mir-430-P1  Rno-Mir-430-P1  Sha-Mir-430-P1  Sto-Mir-430-P1  Tgu-Mir-430-P1  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xtr-Mir-430-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01012655.1: 3307136-3307196 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGAGCACUGGUUUAUGUGGACCCCUUCUACUUUAACAUGGAGGUGCUUUCUGUGUCUACAAAAAAGUAAGUGCUUCCAUGUUUUAGUAGAGGUGAAUCCUGUUCUGUCCUGGAGCAUCC
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Structure
        10         20         30        40        50          
CUGGAGCACUGGUUUAUGU-   CCC-|       UU          UG   U  GUGUCU 
                    GGA    CUUCUACU  AACAUGGAGG  CUU CU      \
                    CCU    GGAGAUGA  UUGUACCUUC  GAA GA      A
CCUACGAGGUCCUGUCUUGU   AAGU^       UU          GU   U  AAAAAC 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), UGUG in loop
Star sequence

Spt-Mir-430-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUUUAACAUGGAGGUGCUUUCU -23
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Mature sequence

Spt-Mir-430-P1_3p (predicted)
mirBase accessionNone
Sequence 
38- UAAGUGCUUCCAUGUUUUAGUAG -61
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