| MirGeneDB ID | Laf-Mir-430-o44 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-430-P1 Laf-Mir-430-P2 Laf-Mir-430-P3 Laf-Mir-430-P4 Laf-Mir-430-P5 Laf-Mir-430-P7 |
| Orthologues | Mml-Mir-430-P44 |
| Node of Origin (locus) | L. africana |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010031.1: 14891773-14891833 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAAAGGUCUUGAACUGCUCAGCCAGUGGUACUCAAUGUGGAAGCACUCUUCUGUUGUUGUACAUGAGAAAGUGCUUCCGUAUUGGAGUGAUAACGGUGGGCACUACCUUCAAGGGGAAACGet precursor sequence |
| Structure | 10 20 30 40 50 GCAAAGGUCUUGAACUG---| G A GG- - C UGUUGUU CUCA CC GU UACUC AAUGUGGAAGCACU UUC \ GGGU GG CA GUGAG UUAUGCCUUCGUGA AAG G CAAAGGGGAACUUCCAUCAC^ - - AUA G - AGUACAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Laf-Mir-430-o44_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUCAAUGUGGAAGCACUCUUC -22
Get sequence
|
| Mature sequence | Laf-Mir-430-o44_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- AAAGUGCUUCCGUAUUGGAGUGA -61
Get sequence
|
