| MirGeneDB ID | Laf-Mir-430-P4 |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAGUGCU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-430-o44 Laf-Mir-430-P1 Laf-Mir-430-P2 Laf-Mir-430-P3 Laf-Mir-430-P5 Laf-Mir-430-P7 |
| Orthologues | Ami-Mir-430-P4 Bta-Mir-430-P4 Cfa-Mir-430-P4 Cja-Mir-430-P4 Cli-Mir-430-P4 Cmi-Mir-430-P4 Cpi-Mir-430-P4 Cpo-Mir-430-P4 Dno-Mir-430-P4 Eca-Mir-430-P4 Ete-Mir-430-P4 Gga-Mir-430-P4 Hsa-Mir-430-P4 Mdo-Mir-430-P4 Mml-Mir-430-P4 Mmr-Mir-430-P4 Mmu-Mir-430-P4 Oan-Mir-430-P4 Ocu-Mir-430-P4 Pab-Mir-430-P4 Rno-Mir-430-P4 Spt-Mir-430-P4 Sto-Mir-430-P4 Tgu-Mir-430-P4 Xla-Mir-430-o4a Xla-Mir-430-o4b Xtr-Mir-430-o4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010041.1: 21847588-21847647 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGUUGUCUAAUCUGUAAAGGGACCCCCUCUACUUAAACAUGGAGGCACUUGCUGUGACAUACUAAAAUAAGUGCUUCCAUGUUUGAGUGUGGUGAAUCCUAACAAAUCUUCAAUUGCUUUGet precursor sequence |
| Structure | 10 20 30 40 50 UGUUGUCUAAUCUGUAAA-- CCC-| UC CUGUGAC GGGA CC UACUUAAACAUGGAGGCACUUG A UCCU GG GUGAGUUUGUACCUUCGUGAAU U UUUCGUUAACUUCUAAACAA AAGU^ U- AAAAUCA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Laf-Mir-430-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUUAAACAUGGAGGCACUUGCU -23
Get sequence
|
| Mature sequence | Laf-Mir-430-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UAAGUGCUUCCAUGUUUGAGUGU -60
Get sequence
|
