Mir-430-P4

MirGeneDB ID

Mmu-Mir-430-P4

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-302d

Paralogues

Mmu-Mir-430-P1 Mmu-Mir-430-P2 Mmu-Mir-430-P3 Mmu-Mir-430-P5a Mmu-Mir-430-P5b Mmu-Mir-430-P5c Mmu-Mir-430-P6 Mmu-Mir-430-P7a Mmu-Mir-430-P7b Mmu-Mir-430-P7c

Orthologues

Ami-Mir-430-P4 Bta-Mir-430-P4 Cfa-Mir-430-P4 Cli-Mir-430-P4 Cmi-Mir-430-P4 Cpi-Mir-430-P4 Cpo-Mir-430-P4 Dno-Mir-430-P4 Ete-Mir-430-P4 Gga-Mir-430-P4 Hsa-Mir-430-P4 Mdo-Mir-430-P4 Mml-Mir-430-P4 Oan-Mir-430-P4 Ocu-Mir-430-P4 Rno-Mir-430-P4 Spt-Mir-430-P4 Sto-Mir-430-P4 Tgu-Mir-430-P4 Xla-Mir-430-o4a Xla-Mir-430-o4b Xtr-Mir-430-o4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(mm10)

chr3: 127545629-127545687 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P4)

Mir-430-P1 chr3: 127545238-127545297 [+] UCSC Ensembl
Mir-430-P2 chr3: 127545368-127545427 [+] UCSC Ensembl
Mir-430-P3 chr3: 127545501-127545561 [+] UCSC Ensembl
Mir-430-P4 chr3: 127545629-127545687 [+] UCSC Ensembl
Mir-92-P2a chr3: 127545741-127545800 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCACUCAAGUCUGCUUAAGGGGCCUCCUUUACUUUAACAUGGAGGCACUUGCUGUGCAUUUAAAAAUAAGUGCUUCCAUGUUUGAGUGUGGUGGCUCCUACUUAAUCUUCAUUGUGCUG

Get precursor sequence

Structure

        10           20        30        40        50         
CCACUCAAGUCUGCUUA---|      U  UU     U                CUGUGCA 
                    AGGGGCC CC  UACUU AACAUGGAGGCACUUG       \
                    UCCUCGG GG  GUGAG UUGUACCUUCGUGAAU       U
GUCGUGUUACUUCUAAUUCA^      U  U-     U                AAAAAUU 
       110       100        90         80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Ad	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt	Wt

Star sequence

Mmu-Mir-430-P4_5p*

mirBase accession

MIMAT0017225

Sequence

0- ACUUUAACAUGGAGGCACUUGCU -23

Get sequence

Proposed targets

TargetScanVert: mmu-miR-302d-5p
miRDB: MIMAT0017225

Mature sequence

Mmu-Mir-430-P4_3p

mirBase accession

MIMAT0003377

Sequence

36- UAAGUGCUUCCAUGUUUGAGUGU -59

Get sequence

Proposed targets

microrna.org: MIMAT0003377
TargetScanVert: mmu-miR-302d-3p
miRDB: MIMAT0003377