MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-o29

Family name MIR-430 (all species)
Seed UUCUAAC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Hsa-Mir-430-P29a  Hsa-Mir-430-P29b  Hsa-Mir-430-P29c  Mml-Mir-430-P29a  Mml-Mir-430-P29b-v1  Mml-Mir-430-P29b-v2  Mml-Mir-430-P29c  Pab-Mir-430-P29a  Pab-Mir-430-P29b  Pab-Mir-430-P29c 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL850554.1: 7912-7971 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGCAGUAAAGAACGACCCAGCCUUGCACAUUCUAACUCUGAGCACUUAUUGGAUAUGUAAGAAGCAUAAGUGCUCUCUGUUAGGAUGAGCCCGACUGAGGAUCAAGACAUUGGUUUGC
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Structure
        10          20        30        40        50         
CAAGCAGUAAAGAACGA-  -|  CCUU  A         UCU          UGGAUAU 
                  CC CAG    GC CAUUCUAAC   GAGCACUUAU       G
                  GG GUC    CG GUAGGAUUG   CUCGUGAAUA       U
CGUUUGGUUACAGAACUA  A^  AGCC  A         UCU          CGAAGAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-430-o29_5p
mirBase accessionNone
Sequence 
0- AUUCUAACUCUGAGCACUUAUU -22
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Co-mature sequence

Sha-Mir-430-o29_3p
mirBase accessionNone
Sequence 
38- UAAGUGCUCUCUGUUAGGAUGA -60
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