MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-o21

Family name MIR-430 (all species)
Seed AAGUACU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-o29  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Hsa-Mir-430-P21  Mml-Mir-430-P21  Pab-Mir-430-P21 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL850554.1: 15527-15586 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAUUGUCAGGACAGCCCAGCCUUGGCACAUUCUAACUGGGAGCACUUAUUGGAUAUGUAAGAACCAUAAGUACUCUCUGUUAGGAUGAGCCUGGCUGAGGAUCGAGCUCCUCUUAAGA
Get precursor sequence
Structure
        10           20        30        40        50         
GCAAUUGUCAGGACAGCC---|    UU   A         U     C      UGGAUAU 
                     CAGCC  GGC CAUUCUAAC GGGAG ACUUAU       G
                     GUCGG  CCG GUAGGAUUG CUCUC UGAAUA       U
AGAAUUCUCCUCGAGCUAGGA^    U-   A         U     A      CCAAGAA 
.       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-430-o21_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUUCUAACUGGGAGCACUUAUU -22
Get sequence
Mature sequence

Sha-Mir-430-o21_3p
mirBase accessionNone
Sequence 
38- UAAGUACUCUCUGUUAGGAUGA -60
Get sequence