MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-o11

Family name MIR-430 (all species)
Seed AAGUGCU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-o29  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Cja-Mir-430-P11  Hsa-Mir-430-P11  Pab-Mir-430-P11 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL850554.1: 9301-9361 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGUGGCACAUGACAACCCAACCUUGCACAUCCUAACUUGGAGCACUUAUGCGAUAUGAAAGAAUCAUAAGUGCUCUUUGUGAAGGAUGAGCUAGACUGAGGAUUAAGCUCCUAAAACAA
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Structure
        10          20        30         40        50         
ACAGUGGCACAUGACAA-  -  AC  U  A      A-| UU            CGAUAU 
                  CC CA  CU GC CAUCCU  AC  GGAGCACUUAUG      G
                  GG GU  GA CG GUAGGA  UG  UCUCGUGAAUAC      A
AACAAAAUCCUCGAAUUA  A  CA  U  A      AG^ UU            UAAGAA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-430-o11_5p*
mirBase accessionNone
Sequence 
0- AUCCUAACUUGGAGCACUUAUG -22
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Mature sequence

Sha-Mir-430-o11_3p
mirBase accessionNone
Sequence 
38- UAAGUGCUCUUUGUGAAGGAUGA -61
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