MirGeneDB ID | Neu-Mir-7254-v2 |
---|---|
Family name | MIR-7254 (all species) |
Seed | UCACCAC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7254-v1 |
Orthologues | Mdo-Mir-7254-v2 Sha-Mir-7254-v2 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 428035356-428035418 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUGCCUGAUGCGCGAUGAUGUCAUUCCCAUAUCACCACCUCCUUGAAUCCUGUUCUAAUGUGAGUGAUGCAGAGUUCAGGGUGGAUGUGGCCUGGGAUUGAACAGGUGAGCUUCUAUGGCCAGGet precursor sequence |
Structure | 10 20 30 40 50 60 CUGCCUGAUGCGCGAUGA- -| U UA CA U UC UCUAAUG UG UCA UCCCA UCAC CC CCUUGAA CUGU \ AC AGU AGGGU GGUG GG GGGACUU GACG U GACCGGUAUCUUCGAGUGG A^ U CC UA U GA UAGUGAG 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Mature sequence | Neu-Mir-7254-v2_5p |
mirBase accession | None |
Sequence |
0- AUCACCACCUCCUUGAAUCCUGU -23
Get sequence
|
Star sequence | Neu-Mir-7254-v2_3p* |
mirBase accession | None |
Sequence |
40- AGAGUUCAGGGUGGAUGUGGCCU -63
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