MirGeneDB ID | Neu-Mir-7379 |
---|---|
Family name | MIR-7379 (all species) |
Seed | CUGGAUG |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Mdo-Mir-7379 Sha-Mir-7379 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95935669-95935725 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CCUCAAAGAUAUGCCUUGAGGUAGUUUCUCUAUAUCACCCAUACAUCCAGAUCUAAUUGAAAAAUCUGGAUGCUUUGAUGGUGUAGAGACACUCCUUCAGACAGCAGCUCUGCUGAGGet precursor sequence |
Structure | 10 20 30 40 50 CCUCAAAGAUAUGCCUU--| U U CC UA- CUAAU GAGG AGU UCUCUAUAUCA CA CAUCCAGAU \ CUUC UCA AGAGAUGUGGU GU GUAGGUCUA U GAGUCGUCUCGACGACAGA^ C C A- UUC AAAAG 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Star sequence | Neu-Mir-7379_5p* (predicted) |
mirBase accession | None |
Sequence |
0- UAUAUCACCCAUACAUCCAGAUC -23
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|
Mature sequence | Neu-Mir-7379_3p (predicted) |
mirBase accession | None |
Sequence |
34- UCUGGAUGCUUUGAUGGUGUAGA -57
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|