| MirGeneDB ID | Npo-Mir-12506 |
|---|---|
| Family name | MIR-12506 (all species) |
| Seed | AGGAUCU |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12506-P1-v1 Esc-Mir-12506-P1-v2 Esc-Mir-12506-P2-v1 Esc-Mir-12506-P2-v2 Obi-Mir-12506-v1 Obi-Mir-12506-v2 Ovu-Mir-12506-v1 Ovu-Mir-12506-v2 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010000920.1: 279226-279289 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCGGCUAUUACGUCCAGCCAUUCCUGCGCAGUUAGUGGUAAAGCCCUUGCAGUUGGUUAUGAAAUCUUUGCAGGAUCUUUAGUCACUAGCUGCACAUGUUUGUCAAUACAGCUCUUGAUGACAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AUCGGCUAUUACGUCCAGCCAUUCC-- C -| CC GUUGGUUA UG GCAGUUAGUGG UAAAG CUUGCA \ AC CGUCGAUCACU AUUUC GGACGU U ACAGUAGUUCUCGACAUAACUGUUUGU A G^ UA UUCUAAAG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-12506_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUUAGUGGUAAAGCCCUUGCA -22
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|
| Mature sequence | Npo-Mir-12506_3p (predicted) |
| mirBase accession | None |
| Sequence |
41- CAGGAUCUUUAGUCACUAGCUGC -64
Get sequence
|
