| MirGeneDB ID | Obi-Mir-12506-v1 |
|---|
| Family name |
MIR-12506 (all species) |
|---|
| Seed |
AGGAUCU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Mir-12506-v2
|
|---|
| Orthologues |
Npo-Mir-12506
Ovu-Mir-12506-v1
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ418355: 389258-389321 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGCUGUUACAGAAGUCAGCCGUUUGUAUGCAGUUAGUGGUAAAGCCCUUGCAUUAGGUAUCUGAAGUGUUGCAGGAUCUUUAGUCACUAGCUGCAUAAGGAUGGCACCGUACAUCAUGUGAUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGCUGUUACAGAAGUCA-- UG -| CC UUAGGUAU
GCCGUU UAUGCAGUUAGUGG UAAAG CUUGCA \
CGGUAG AUACGUCGAUCACU AUUUC GGACGU C
CAUAGUGUACUACAUGCCA GA G^ UA UGUGAAGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-12506-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUAGUGGUAAAGCCCUUGCA -22
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12506-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- CAGGAUCUUUAGUCACUAGCUGC -64
Get sequence
|
|---|
