MirGeneDB 2.1
MirGeneDB ID

Nve-Mir-2051

Family name MIR-2051 (all species)
Seed ACCGGAG
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2051
Paralogues
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)		 NW_001834183.1: 5198-5253 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2051)		 Mir-2051 NW_001834183.1: 5198-5253 [-] Ensembl
Mir-2042 NW_001834183.1: 5544-5593 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACACACGACAUGUACGGGCCCGCCUAUGAAAAUAGAAAAGCUUCCGGUUUUUUGACAUCGCAAUACCGGAGUCUUUUCUGUGUCCAUAUUCGUGACCAGAAUCAAUUUAGAGAUU
Get precursor sequence
Structure
        10         20          30        40        50       
AACACACGACAUGUACG-  CC   C--|   AAA         C       UUUUUGA 
                  GG  CGC   UAUG   AUAGAAAAG UUCCGGU       C
                  CC  GUG   AUAC   UGUCUUUUC GAGGCCA       A
UUAGAGAUUUAACUAAGA  A-   CUU^   CUG         U       UAACGCU 
    110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Bl Ju La Pr
Star sequence

Nve-Mir-2051_5p*
mirBase accessionMIMAT0009828
Sequence 
0- AAAUAGAAAAGCUUCCGGUUUU -22
Get sequence
Mature sequence

Nve-Mir-2051_3p
mirBase accessionMIMAT0009829
Sequence 
34- UACCGGAGUCUUUUCUGUGUCC -56
Get sequence