MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-1422-P9

Family name MIR-1422 (all species)
Seed GAAAACC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-1422c
Paralogues Oan-Mir-1422-P1  Oan-Mir-1422-P2  Oan-Mir-1422-P3  Oan-Mir-1422-P4  Oan-Mir-1422-P5  Oan-Mir-1422-P6  Oan-Mir-1422-P7  Oan-Mir-1422-P8  Oan-Mir-1422-P10  Oan-Mir-1422-P11  Oan-Mir-1422-P12  Oan-Mir-1422-P13  Oan-Mir-1422-P14  Oan-Mir-1422-P15  Oan-Mir-1422-P16  Oan-Mir-1422-P17  Oan-Mir-1422-P18 
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041749.1: 94746545-94746603 [-]
Clustered miRNAs
(< 50kb from Mir-1422-P9)
Mir-1422-P13 NC_041749.1: 94731555-94731614 [-]
Mir-1422-P12 NC_041749.1: 94733107-94733168 [-]
Mir-1422-P1 NC_041749.1: 94735825-94735883 [-]
Mir-1422-P2 NC_041749.1: 94736816-94736874 [-]
Mir-1422-P3 NC_041749.1: 94737600-94737660 [-]
Mir-1422-P4 NC_041749.1: 94738351-94738409 [-]
Mir-1422-P5 NC_041749.1: 94739031-94739089 [-]
Mir-1422-P6 NC_041749.1: 94740235-94740295 [-]
Mir-1422-P7 NC_041749.1: 94741858-94741917 [-]
Mir-1422-P8 NC_041749.1: 94743026-94743086 [-]
Mir-1422-P9 NC_041749.1: 94746545-94746603 [-]
Mir-1422-P10 NC_041749.1: 94747570-94747631 [-]
Mir-1422-P11 NC_041749.1: 94748332-94748391 [-]
Mir-1422-P18 NC_041749.1: 94754440-94754500 [-]
Mir-1422-P14 NC_041749.1: 94758854-94758914 [-]
Mir-1422-P15 NC_041749.1: 94759650-94759706 [-]
Mir-1422-P16 NC_041749.1: 94762729-94762788 [-]
Mir-1422-P17 NC_041749.1: 94763638-94763693 [-]
Mir-1376 NC_041749.1: 94770564-94770621 [-]
Precursor
(pre-Mir +30nt flank)
AGGUGGAGAUGACCAUCCUGAUUCUGGUUUCAAUCCAUACUAGUCUUUCUAUAUGUACAGAUAAUGUAGAAAACCUGGUAUGGAUUGUUACCAGGUUCAGAUUAUAUACUUAGAGCCCA
Get precursor sequence
Structure
        10          20        30        40        50         
AGGUGGAGAUGACCAUC--|   UU     UU             UC       AUGUAC 
                   CUGA  CUGGU  CAAUCCAUACUAG  UUUCUAU      \
                   GACU  GACCA  GUUAGGUAUGGUC  AAAGAUG      A
ACCCGAGAUUCAUAUAUUA^   UG     UU             CA       UAAUAG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-1422-P9_5p*

mirBase accessionMIMAT0006891
Sequence
0- CAAUCCAUACUAGUCUUUCUAU -22
Get sequence
Mature sequence

Oan-Mir-1422-P9_3p

mirBase accessionMIMAT0006892
Sequence
37- AGAAAACCUGGUAUGGAUUGUU -59
Get sequence