Mir-1422-P9

MirGeneDB ID

Oan-Mir-1422-P9

Family name

MIR-1422 (all species)

Seed

GAAAACC

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-1422c

Paralogues

Oan-Mir-1422-P1 Oan-Mir-1422-P2 Oan-Mir-1422-P3 Oan-Mir-1422-P4 Oan-Mir-1422-P5 Oan-Mir-1422-P6 Oan-Mir-1422-P7 Oan-Mir-1422-P8 Oan-Mir-1422-P10 Oan-Mir-1422-P11 Oan-Mir-1422-P12 Oan-Mir-1422-P13 Oan-Mir-1422-P14 Oan-Mir-1422-P15 Oan-Mir-1422-P16 Oan-Mir-1422-P17 Oan-Mir-1422-P18

Orthologues

Node of Origin (locus)

O. anatinus

Node of Origin (family)

O. anatinus

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041749.1: 94746545-94746603 [-]

Clustered miRNAs
(< 50kb from Mir-1422-P9)

Mir-1422-P13 NC_041749.1: 94731555-94731614 [-]
Mir-1422-P12 NC_041749.1: 94733107-94733168 [-]
Mir-1422-P1 NC_041749.1: 94735825-94735883 [-]
Mir-1422-P2 NC_041749.1: 94736816-94736874 [-]
Mir-1422-P3 NC_041749.1: 94737600-94737660 [-]
Mir-1422-P4 NC_041749.1: 94738351-94738409 [-]
Mir-1422-P5 NC_041749.1: 94739031-94739089 [-]
Mir-1422-P6 NC_041749.1: 94740235-94740295 [-]
Mir-1422-P7 NC_041749.1: 94741858-94741917 [-]
Mir-1422-P8 NC_041749.1: 94743026-94743086 [-]
Mir-1422-P9 NC_041749.1: 94746545-94746603 [-]
Mir-1422-P10 NC_041749.1: 94747570-94747631 [-]
Mir-1422-P11 NC_041749.1: 94748332-94748391 [-]
Mir-1422-P18 NC_041749.1: 94754440-94754500 [-]
Mir-1422-P14 NC_041749.1: 94758854-94758914 [-]
Mir-1422-P15 NC_041749.1: 94759650-94759706 [-]
Mir-1422-P16 NC_041749.1: 94762729-94762788 [-]
Mir-1422-P17 NC_041749.1: 94763638-94763693 [-]
Mir-1376 NC_041749.1: 94770564-94770621 [-]

Precursor
(pre-Mir +30nt flank)

AGGUGGAGAUGACCAUCCUGAUUCUGGUUUCAAUCCAUACUAGUCUUUCUAUAUGUACAGAUAAUGUAGAAAACCUGGUAUGGAUUGUUACCAGGUUCAGAUUAUAUACUUAGAGCCCA

Get precursor sequence

Structure

        10          20        30        40        50         
AGGUGGAGAUGACCAUC--|   UU     UU             UC       AUGUAC 
                   CUGA  CUGGU  CAAUCCAUACUAG  UUUCUAU      \
                   GACU  GACCA  GUUAGGUAUGGUC  AAAGAUG      A
ACCCGAGAUUCAUAUAUUA^   UG     UU             CA       UAAUAG 
       110       100        90        80        70        60