| MirGeneDB ID | Obi-Mir-12547 |
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| Family name |
MIR-12547 (all species) |
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| Seed |
GUCUCAU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12547
Ovu-Mir-12547
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ423887: 292361-292418 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUAAAGAUAUCACUCAUGCUGAUUUCUAUAGUCUCAUGUAUUGGAAUGUUGCCUCUAUUUUACCAACAUUCCAGUGCAUGAGUCAUAGAGAACAGUUCAAGGCAUCAUAAUAGUCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUAAAGAUAUCACUCAU---| A AGU CCUCU
GCUG UUUCUAU CUCAUGUAUUGGAAUGUUG A
UGAC AGAGAUA GAGUACGUGACCUUACAAC U
AACUGAUAAUACUACGGAACU^ A CU- CAUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12547_5p |
| mirBase accession | None |
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| Sequence |
0- AGUCUCAUGUAUUGGAAUGUUG -22
Get sequence
|
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| Star sequence |
Obi-Mir-12547_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- ACAUUCCAGUGCAUGAGUCAUA -58
Get sequence
|
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