MirGeneDB 3.0

MirGeneDB ID

Ovu-Mir-12502

Family name MIR-12502 (all species)
Seed GUUCCUA
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12502  Npo-Mir-12502  Obi-Mir-12502 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01019738.1: 354-413 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAUUCUGUUACCAAACUUUUCUAUCAUAUUCGGUCCUUUUUGGGACCUCGUUUCAAUCUAACGGAAGUUCCUAGAUGGACUGAGAAUGGUAGGUAAGUUCGACCACCAUAGCACCCU
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Structure
        10          20        30        40        50         
AAAUAUUCUGUUACCAA--|   U        A        U   U     C  GUUUCA 
                   ACUU UCUAUCAU UUCGGUCC UUU GGGAC UC      A
                   UGAA GGAUGGUA GAGUCAGG AGA CCUUG AG      U
UCCCACGAUACCACCAGCU^   U        A        U   U     A  GCAAUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-12502_5p*

mirBase accessionNone
Sequence
0- AUUCGGUCCUUUUUGGGACCUC -22
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Mature sequence

Ovu-Mir-12502_3p

mirBase accessionNone
Sequence
38- AGUUCCUAGAUGGACUGAGAAU -60
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