| MirGeneDB ID | Ovu-Novel-1 |
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| Family name |
CEP-NOVEL-1 (all species) |
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| Seed |
GGGGAUG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-1
Npo-Novel-1
Obi-Novel-1
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01016389.1: 512059-512119 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGGGAUCUACAGACACUUGACUAGGUAAUGCCCUUCACAGGUAUCUCCUGGAUUUGAACUGAAACCUGGGGAUGCUGUGAAUGGUUCUUACCUGGUUAGGAUUACGUCGAAACUGUUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAGGGAUCUACAGACA-- U-| C G U AUUUGA
CUUGACUAGGUAA GCC UUCACAG UAUCUCC GG \
GGAUUGGUCCAUU UGG AAGUGUC GUAGGGG CC A
AUUUGUCAAAGCUGCAUUA CU^ U - U AAAGUC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
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| Star sequence |
Ovu-Novel-1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGCCCUUCACAGGUAUCUCCUGG -23
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGGGGAUGCUGUGAAUGGUUCUU -61
Get sequence
|
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