| MirGeneDB ID | Pab-Mir-430-P33b |
|---|---|
| Family name | MIR-430 (all species) |
| Seed | AAAGUGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-430-P1 Pab-Mir-430-P2 Pab-Mir-430-P3 Pab-Mir-430-P4 Pab-Mir-430-P5 Pab-Mir-430-P6 Pab-Mir-430-P7 Pab-Mir-430-P8 Pab-Mir-430-P9a Pab-Mir-430-P9b Pab-Mir-430-P10 Pab-Mir-430-P11 Pab-Mir-430-P12a Pab-Mir-430-P12b Pab-Mir-430-P13 Pab-Mir-430-P14 Pab-Mir-430-P15 Pab-Mir-430-P16 Pab-Mir-430-P17 Pab-Mir-430-P18 Pab-Mir-430-P19 Pab-Mir-430-P20 Pab-Mir-430-P21 Pab-Mir-430-P22 Pab-Mir-430-P23 Pab-Mir-430-P24 Pab-Mir-430-P27 Pab-Mir-430-P28 Pab-Mir-430-P29a Pab-Mir-430-P29b Pab-Mir-430-P29c Pab-Mir-430-P30 Pab-Mir-430-P31a Pab-Mir-430-P31b Pab-Mir-430-P32 Pab-Mir-430-P33a Pab-Mir-430-P34a Pab-Mir-430-P34b Pab-Mir-430-P36 Pab-Mir-430-P37a Pab-Mir-430-P37b Pab-Mir-430-P37c Pab-Mir-430-P38 Pab-Mir-430-P39 Pab-Mir-430-P40a Pab-Mir-430-P40b Pab-Mir-430-P41a Pab-Mir-430-P41b |
| Orthologues | Hsa-Mir-430-P33b Mal-Mir-430-o33 Mml-Mir-430-P33 |
| Node of Origin (locus) | Hominidae |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 60117180-60117239 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGGAGCAAGAAGAUCCCACGCUGUGACCCUCUAGAGGAAGCACUUUCUGUUUGUUGUCCGAGAGAAAACAAAGUGCUUCCCUUUAGAGUGUUACGUUUGGGAAAAGCCGCGUUGAAGUUGet precursor sequence |
| Structure | 10 20 30 40 50 CUGGAGCAAGAAGAUCC---| C U C - UC UGUUGUC CA GC GUGAC CUCUAGAGG AAGCACUU UGUU \ GU UG CAUUG GAGAUUUCC UUCGUGAA ACAA C UUGAAGUUGCGCCGAAAAGG^ U - U C -- AAGAGAG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Pab-Mir-430-P33b_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCUAGAGGAAGCACUUUCUGUU -22
Get sequence
|
| Mature sequence | Pab-Mir-430-P33b_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- CAAAGUGCUUCCCUUUAGAGU -60
Get sequence
|
