MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-221-P2o1

Family name MIR-221 (all species)
Seed GCUACAU
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-221
Paralogues Pma-Mir-221-P1o1 
Orthologues
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046138.1: 4278405-4278466 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-221-P2o1)		 Mir-221-P2o1 NC_046138.1: 4278405-4278466 [-] UCSC Ensembl
Mir-221-P1o1 NC_046138.1: 4279200-4279261 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGACGUUCUGCUACUGGGUCGAGGCCUGGACCUGGCACACAGUGUAGGAGACUGUGUAACCAUGGCAACAGCUACAUUGUCUGCUGGGUUCAGGUUGCCUGGCAACGCCUCCCAGGACCGC
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Structure
        10        20           30        40        50        60
UCGACGUUCUGCUACUGG   G    ---|      UG   C         GAGACUGUGUA 
                  GUC AGGC   CUGGACC  GCA ACAGUGUAG           A
                  CGG UCCG   GACUUGG  CGU UGUUACAUC           C
CGCCAGGACCCUCCGCAA   -    UUG^      GU   C         GACAACGGUAC 
120       110        100        90        80        70
Deep sequencing
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CommentThere is a single snp between the assembled genome and the miRBase entry.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-221-P2o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCUGGCACACAGUGUAGGAGA -22
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Mature sequence

Pma-Mir-221-P2o1_3p
mirBase accessionMIMAT0019532
Sequence 
40- AGCUACAUUGUCUGCUGGGUUC -62
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