| MirGeneDB ID | Sha-Mir-7250 |
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| Family name |
MIR-7250 (all species) |
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| Seed |
ACGGCCC |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-7250
Neu-Mir-7250
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL834588.1: 1662335-1662394 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUACCGGGAAGCUUUGUGACCUUGUGGUUCUACGGCCCCUCCAGGGAACCACGUGCAUCAGGGAACUACGUGGCCCCAGGAGAGGAUGGAACCACAUGGCUCCAGAGAUGGCAGCAGGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CUACCGGGAAGCUUUGU- -| U CGG C A AA CAUCA
GA CC UGUGGUUCUA CC CUCC GGG CCACGUG \
CU GG ACACCAAGGU GG GAGG CCC GGUGCAU G
ACGGACGACGGUAGAGAC C^ U A-- A A C- CAAGG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7250_5p |
| mirBase accession | None |
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| Sequence |
0- UACGGCCCCUCCAGGGAACCACGUG -25
Get sequence
|
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| Star sequence |
Sha-Mir-7250_3p* |
| mirBase accession | None |
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| Sequence |
38- CGUGGCCCCAGGAGAGGAUGGA -60
Get sequence
|
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