Mir-7373-o5

MirGeneDB ID

Sha-Mir-7373-o5

Family name

MIR-7373 (all species)

Seed

AGCCCUU

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-7373-o1 Sha-Mir-7373-o2 Sha-Mir-7373-o3 Sha-Mir-7373-o4 Sha-Mir-7373-o6 Sha-Mir-7373-o7 Sha-Mir-7373-o8a Sha-Mir-7373-o8b Sha-Mir-7373-o8c Sha-Mir-7373-o8d1 Sha-Mir-7373-o8d2 Sha-Mir-7373-o8e Sha-Mir-7373-o8f Sha-Mir-7373-o8g Sha-Mir-7373-o8h Sha-Mir-7373-o8i Sha-Mir-7373-o8j Sha-Mir-7373-o9a Sha-Mir-7373-o9b Sha-Mir-7373-o9c

Orthologues

Mdo-Mir-7373-P5a Mdo-Mir-7373-P5b Mdo-Mir-7373-P5c Mdo-Mir-7373-P5d Mdo-Mir-7373-P5e Mdo-Mir-7373-P5f Mdo-Mir-7373-P5g Neu-Mir-7373

Node of Origin (locus)

S. harrisii

Node of Origin (family)

Marsupialia

Genome context
(DEVIL_add)

GL867601.1: 2074961-2075015 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GGAAAAGAAGAUCCACUGAGAUGGUGGGGCUAGCCCUUGUCCUUCUGCCUUAGAAAUGCUACUAAGACAGAAAGUAAGGGUUGGCUCCAUCAUUUCACAGCACAACACGCUCCGG

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Structure

        10          20        30        40        50       
GGAAAAGAAGAUCCACU--|                     UCC     C     AAA 
                   GAGAUGGUGGGGCUAGCCCUUG   UUCUG CUUAG   U
                   CUUUACUACCUCGGUUGGGAAU   AAGAC GAAUC   G
GGCCUCGCACAACACGACA^                     GA-     A     AUC 
   110       100        90        80         70        60

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Mature sequence

Sha-Mir-7373-o5_5p

mirBase accession

None

Sequence

0- UAGCCCUUGUCCUUCUGCCUUAG -23

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Co-mature sequence

Sha-Mir-7373-o5_3p

mirBase accession

None

Sequence

33- AAGACAGAAAGUAAGGGUUGGC -55

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