Mir-7373-o9b

MirGeneDB ID

Sha-Mir-7373-o9b

Family name

MIR-7373 (all species)

Seed

AGCCCUU

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-7373-o1 Sha-Mir-7373-o2 Sha-Mir-7373-o3 Sha-Mir-7373-o4 Sha-Mir-7373-o5 Sha-Mir-7373-o6 Sha-Mir-7373-o7 Sha-Mir-7373-o8a Sha-Mir-7373-o8b Sha-Mir-7373-o8c Sha-Mir-7373-o8d1 Sha-Mir-7373-o8d2 Sha-Mir-7373-o8e Sha-Mir-7373-o8f Sha-Mir-7373-o8g Sha-Mir-7373-o8h Sha-Mir-7373-o8i Sha-Mir-7373-o8j Sha-Mir-7373-o9a Sha-Mir-7373-o9c

Orthologues

Mdo-Mir-7373-P9b Neu-Mir-7373

Node of Origin (locus)

S. harrisii

Node of Origin (family)

Marsupialia

Genome context
(DEVIL_add)

GL867601.1: 2081002-2081059 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUAGGGAAGGUCCUGCUGAGAUGGAGGGGCAAGCCCUUACCCCACUGCUUAAUAGGUGUUAAUCUGUUUGGGUGGGGGAAGGUACUACUCCUUCAUCUUACAACACAACAGCCCUCAA

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Structure

        10          20        30        40           50       
GUAGGGAAGGUCCUGCU--            CAAGC    A       ---| UUAAUAGG 
                   GAGAUGGAGGGG     CCUU CCCCACU   GC        \
                   UUCUACUUCCUC     GGAA GGGGUGG   UG        U
AACUCCCGACAACACAACA            AUCAU    G       GUU^ UCUAAUUG 
      110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Mature sequence

Sha-Mir-7373-o9b_5p

mirBase accession

None

Sequence

0- AAGCCCUUACCCCACUGCUUAAU -23

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Co-mature sequence

Sha-Mir-7373-o9b_3p

mirBase accession

None

Sequence

36- UUUGGGUGGGGGAAGGUACUAC -58

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