| MirGeneDB ID | Sha-Mir-7394-P1 |
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| Family name |
MIR-7394 (all species) |
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| Seed |
AUGUGUG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
|
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| Paralogues |
Sha-Mir-7394-P2
Sha-Mir-7394-P3
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| Orthologues |
Mdo-Mir-7394-P1
Neu-Mir-7394-P1
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL867604.1: 514669-514722 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCUGCUGCAUCAUUGUGUGGCCUCAGCAAUAUGUGUGUCCAAAUUAUAUGUGUUUCUUUACAUGUAACCUGGCCACACAUAUUCCUGGAGUAUACCUAUUCUUCCAUAUUUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCUGCUGCAUCAUUGU- -| CU C U AA GUU
GUG GC CAG AAUAUGUGUG CCA UUAUAUGU U
CAU UG GUC UUAUACACAC GGU AAUGUACA C
CCUUUAUACCUUCUUAUC A^ AG C C CC UUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7394-P1_5p |
| mirBase accession | None |
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| Sequence |
0- UAUGUGUGUCCAAAUUAUAUGU -22
Get sequence
|
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| Star sequence |
Sha-Mir-7394-P1_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
32- AUGUAACCUGGCCACACAUAUU -54
Get sequence
|
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