MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-7394-P1

Family name MIR-7394 (all species)
Seed AUGUGUG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7394a
Paralogues Mdo-Mir-7394-P2  Mdo-Mir-7394-P3 
Orthologues Neu-Mir-7394-P1  Sha-Mir-7394-P1 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 X: 47660934-47660987 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7394-P1)		 Mir-7392-P1b X: 47647594-47647650 [+] UCSC Ensembl
Mir-7393 X: 47653725-47653778 [+] UCSC Ensembl
Mir-7392-P1a X: 47656551-47656607 [+] UCSC Ensembl
Mir-7394-P1 X: 47660934-47660987 [+] UCSC Ensembl
Mir-7395 X: 47661482-47661537 [+] UCSC Ensembl
Mir-7394-P2 X: 47667188-47667241 [+] UCSC Ensembl
Mir-7397 X: 47672118-47672173 [+] UCSC Ensembl
Mir-7394-P3 X: 47675602-47675655 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAGCAUCAGAGUUCUGUUGCCUCAGCUAUAUGUGUGUCCAUGUUACAUGUGUUUCUCUACAUGUAACCUAGUCACACGUAUUCCUGGUGUAUACCUAUGUCUCCACAUUUAC
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Structure
        10          20        30        40        50      
UUCAGCAUCAGAGUUCUGU--|  C    CU         UCCAU         GUU 
                     UGC UCAG  AUAUGUGUG     GUUACAUGU   U
                     AUG GGUC  UAUGCACAC     CAAUGUACA   C
CAUUUACACCUCUGUAUCCAU^  U    CU         UGAUC         UCU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7394-P1_5p
mirBase accessionMIMAT0028886
Sequence 
0- UAUGUGUGUCCAUGUUACAUGU -22
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Proposed targets TargetScanVert: mdo-miR-7394a-5p
Star sequence

Mdo-Mir-7394-P1_3p*
mirBase accessionMIMAT0028887
Sequence 
32- AUGUAACCUAGUCACACGUAUU -54
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Proposed targets TargetScanVert: mdo-miR-7394a-3p