MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-7392-P1b

Family name MIR-7392 (all species)
Seed ACGAGUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7392-2
Paralogues Mdo-Mir-7392-P1a 
Orthologues Neu-Mir-7392 
Node of Origin (locus) M. domestica
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 X: 47647594-47647650 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7392-P1b)		 Mir-7392-P1b X: 47647594-47647650 [+] UCSC Ensembl
Mir-7393 X: 47653725-47653778 [+] UCSC Ensembl
Mir-7392-P1a X: 47656551-47656607 [+] UCSC Ensembl
Mir-7394-P1 X: 47660934-47660987 [+] UCSC Ensembl
Mir-7395 X: 47661482-47661537 [+] UCSC Ensembl
Mir-7394-P2 X: 47667188-47667241 [+] UCSC Ensembl
Mir-7397 X: 47672118-47672173 [+] UCSC Ensembl
Mir-7394-P3 X: 47675602-47675655 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAGUAUCCAAGUAGGAAGUUGCCCCUGGUACGAGUAUACCUUGGUUACGUGUUAGUAAAAAUAGUAACCAUGACAUACUCGUUCCUGGUGUAUACUUCUUUGCACAAGUUGAUUA
Get precursor sequence
Structure
        10         20         30        40        50        
UGAAGUAUCCAAGUAGG-    -|  C  U  U        ACCU       GUGUUAG 
                  AAGU UGC CC GG ACGAGUAU    UGGUUAC       \
                  UUCA AUG GG CC UGCUCAUA    ACCAAUG       U
AUUAGUUGAACACGUUUC    U^  U  U  U        CAGU       AUAAAAA 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 relative to what is annoated here and which corresponds to the cut in Sarcophilus.
3' NTU No
MotifsNo
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7392-P1b_5p
mirBase accessionMIMAT0028882
Sequence 
0- UACGAGUAUACCUUGGUUACGU -22
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Proposed targets TargetScanVert: mdo-miR-7392-5p
Star sequence

Mdo-Mir-7392-P1b_3p*
mirBase accessionMIMAT0028883
Sequence 
35- GUAACCAUGACAUACUCGUUCC -57
Get sequence
Proposed targets TargetScanVert: mdo-miR-7392-3p