| MirGeneDB ID | Sha-Mir-7394-P2 |
|---|
| Family name |
MIR-7394 (all species) |
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| Seed |
GUGACCU |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
Sha-Mir-7394-P1
Sha-Mir-7394-P3
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| Orthologues |
Mdo-Mir-7394-P2
Neu-Mir-7394-P2
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL867604.1: 524445-524498 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGAAACAUUAGAAUUUAGUUGCCCCAGCUACACAUAUGCCAAGGUGACAUGCUACUCUACAUGUGACCUCAACAUAUGUGUUUCUGUGACAUGACUUUGAUCAAGUUUAAUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGAAACAUUAGAAUUUA-----| UG CCC CU CCA G GCUA
GU C AG ACACAUAUG AGGU ACAU C
CA G UC UGUGUAUAC UCCA UGUA U
GGUAAUUUGAACUAGUUUCAGUA^ GU --- UU AAC G CAUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-7394-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACACAUAUGCCAAGGUGACAU -21
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-7394-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UGUGACCUCAACAUAUGUGUUU -54
Get sequence
|
|---|
