| MirGeneDB ID | Snu-Mir-1995 |
|---|
| Family name |
MIR-1995 (all species) |
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| Seed |
UACAUCU |
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| Species |
Peanut worm (Sipunculus nudus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cte-Mir-1995
Efe-Mir-1995-P1
Efe-Mir-1995-P2
Ofu-Mir-1995
Pdu-Mir-1995
|
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| Node of Origin (locus) |
Annelida
|
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| Node of Origin (family) |
Annelida
|
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Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus) |
CM049306.1: 40607470-40607526 [+]
|
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Precursor
(pre-Mir +30nt flank) |
CACGUGACAACAGAACCAGGGGAAGCACUUGUACAUCUCACAUUGUGAUCGUGGAAUGUUACAACGAUCACUUUGUGAAAUGUGAACGUGAACCCCGACAACCAACCACGCCUGGUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACGUGACAACAGAACCA---| AAG UUG C UU GGAAU
GGGG CAC UACAU UCACA GUGAUCGU \
CCCC GUG GUGUA AGUGU CACUAGCA G
CUGGUCCGCACCAACCAACAG^ AA- CAA A UU ACAUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Snu-Mir-1995_5p |
| mirBase accession | None |
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| Sequence |
0- GUACAUCUCACAUUGUGAUCGU -22
Get sequence
|
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| Star sequence |
Snu-Mir-1995_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- GAUCACUUUGUGAAAUGUGAAC -57
Get sequence
|
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