| MirGeneDB ID | Sro-Mir-12497 |
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| Family name |
MIR-12497 (all species) |
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| Seed |
CCAGAGA |
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| Species |
Roscoff worm (Symsagittifera roscoffensis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hmi-Mir-12497-P1
Hmi-Mir-12497-P2
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| Node of Origin (locus) |
Acoela
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| Node of Origin (family) |
Acoela
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Genome context
(GCA_025153585.1_SymRos_1_5_genomic) |
JANVAR010000375.1: 336831-336899 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAACAGACUCAGUGAUGGUUAUUGUGGCAAUGGGAAGUUGGGUGUCUUGAUGGCGUGAAUGCACUUCAGAUAACCACCAGAGAUCCAAACCUUCCCACGGUCACUUAACCACGAAUGAUCAACAACUCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CAACAGACUCAGUGAUG--- UU AA --| G U A CGUGAAUGC
GUUA GUGGC UGGGAAG UUGGGU UCU G UGG A
CAAU CACUG ACCCUUC AACCUA AGA C ACC C
GCUCAACAACUAGUAAGCAC U- GC CA^ G - C AAUAGACUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Sro-Mir-12497_5p* |
| mirBase accession | None |
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| Sequence |
0- UGGGAAGUUGGGUGUCUUGAUGG -23
Get sequence
|
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| Mature sequence |
Sro-Mir-12497_3p |
| mirBase accession | None |
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| Sequence |
45- ACCAGAGAUCCAAACCUUCCCACG -69
Get sequence
|
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